Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Gm12922-201ENSMUST00000120626 809 ntBASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Trav6-2Q5R1I4 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6-2Q5R1I4 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Trav6-2Q5R1I4 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Trav6-2Q5R1I4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC18.83■□□□□ 0.6
Trav6-2Q5R1I4 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Trav6-2Q5R1I4 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Trav6-2Q5R1I4 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.8■□□□□ 0.6
Trav6-2Q5R1I4 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Trav6-2Q5R1I4 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Gm21956-201ENSMUST00000179946 522 ntBASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Trav6-2Q5R1I4 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Trav6-2Q5R1I4 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Trav6-2Q5R1I4 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
Trav6-2Q5R1I4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-2Q5R1I4 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-2Q5R1I4 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC18.75■□□□□ 0.59
Trav6-2Q5R1I4 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC18.75■□□□□ 0.59
Trav6-2Q5R1I4 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Trav6-2Q5R1I4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Trav6-2Q5R1I4 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Trav6-2Q5R1I4 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Trav6-2Q5R1I4 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-2Q5R1I4 Gm12821-201ENSMUST00000120022 600 ntBASIC18.71■□□□□ 0.59
Trav6-2Q5R1I4 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-2Q5R1I4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Trav6-2Q5R1I4 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 138.8 ms