Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Mir3960-201ENSMUST00000198213 73 ntBASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm9939-201ENSMUST00000067161 1154 ntBASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Trav15-1-dv6-1Q5R1D2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC16.52■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Gm6821-201ENSMUST00000107540 542 ntBASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 AC154454.1-201ENSMUST00000225253 216 ntBASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC16.49■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Trav15-1-dv6-1Q5R1D2 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Gm45364-201ENSMUST00000210883 159 ntBASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC16.42■□□□□ 0.22
Trav15-1-dv6-1Q5R1D2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms