Protein–RNA interactions for Protein: Q5H8C4

Vps13a, Vacuolar protein sorting-associated protein 13A, mousemouse

Predictions only

Length 3,166 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps13aQ5H8C4 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vps13aQ5H8C4 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Vps13aQ5H8C4 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC21.75■■□□□ 1.07
Vps13aQ5H8C4 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vps13aQ5H8C4 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Gm43017-201ENSMUST00000198296 752 ntBASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Vps13aQ5H8C4 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps13aQ5H8C4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Vps13aQ5H8C4 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Vps13aQ5H8C4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Vps13aQ5H8C4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Vps13aQ5H8C4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC21.71■■□□□ 1.07
Vps13aQ5H8C4 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.71■■□□□ 1.07
Vps13aQ5H8C4 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Vps13aQ5H8C4 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps13aQ5H8C4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.7■■□□□ 1.06
Vps13aQ5H8C4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Vps13aQ5H8C4 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Vps13aQ5H8C4 Gm27405-201ENSMUST00000184201 112 ntBASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Vps13aQ5H8C4 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Vps13aQ5H8C4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vps13aQ5H8C4 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Vps13aQ5H8C4 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps13aQ5H8C4 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Vps13aQ5H8C4 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.67■■□□□ 1.06
Vps13aQ5H8C4 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps13aQ5H8C4 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Vps13aQ5H8C4 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC21.66■■□□□ 1.06
Vps13aQ5H8C4 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.66■■□□□ 1.06
Vps13aQ5H8C4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Vps13aQ5H8C4 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Vps13aQ5H8C4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps13aQ5H8C4 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps13aQ5H8C4 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Vps13aQ5H8C4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC21.64■■□□□ 1.06
Vps13aQ5H8C4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Vps13aQ5H8C4 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Vps13aQ5H8C4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Vps13aQ5H8C4 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps13aQ5H8C4 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Vps13aQ5H8C4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.64■■□□□ 1.05
Vps13aQ5H8C4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Vps13aQ5H8C4 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Vps13aQ5H8C4 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Vps13aQ5H8C4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Vps13aQ5H8C4 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Gm37179-201ENSMUST00000194862 823 ntBASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Vps13aQ5H8C4 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps13aQ5H8C4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Vps13aQ5H8C4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 110 ms