Protein–RNA interactions for Protein: Q52KR3

Prune2, Protein prune homolog 2, mousemouse

Predictions only

Length 3,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prune2Q52KR3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Prune2Q52KR3 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Prune2Q52KR3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.46■□□□□ 0.87
Prune2Q52KR3 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Prune2Q52KR3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.45■□□□□ 0.86
Prune2Q52KR3 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.45■□□□□ 0.86
Prune2Q52KR3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prune2Q52KR3 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prune2Q52KR3 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prune2Q52KR3 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Prune2Q52KR3 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Prune2Q52KR3 Gm27405-201ENSMUST00000184201 112 ntBASIC20.43■□□□□ 0.86
Prune2Q52KR3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Fezf2-202ENSMUST00000224023 1917 ntBASIC20.43■□□□□ 0.86
Prune2Q52KR3 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Prune2Q52KR3 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.42■□□□□ 0.86
Prune2Q52KR3 Gm43017-201ENSMUST00000198296 752 ntBASIC20.42■□□□□ 0.86
Prune2Q52KR3 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
Prune2Q52KR3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Prune2Q52KR3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Prune2Q52KR3 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Prune2Q52KR3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prune2Q52KR3 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prune2Q52KR3 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Prune2Q52KR3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Prune2Q52KR3 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Prune2Q52KR3 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prune2Q52KR3 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prune2Q52KR3 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Prune2Q52KR3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Prune2Q52KR3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Prune2Q52KR3 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.39■□□□□ 0.85
Prune2Q52KR3 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Prune2Q52KR3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.37■□□□□ 0.85
Prune2Q52KR3 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Prune2Q52KR3 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Prune2Q52KR3 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prune2Q52KR3 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prune2Q52KR3 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prune2Q52KR3 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.36■□□□□ 0.85
Prune2Q52KR3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Prune2Q52KR3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
Prune2Q52KR3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Mir7075-201ENSMUST00000184187 82 ntBASIC20.35■□□□□ 0.85
Prune2Q52KR3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Prune2Q52KR3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prune2Q52KR3 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Prune2Q52KR3 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Prune2Q52KR3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Prune2Q52KR3 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC20.34■□□□□ 0.85
Prune2Q52KR3 Gm43137-201ENSMUST00000198052 594 ntBASIC20.33■□□□□ 0.85
Prune2Q52KR3 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prune2Q52KR3 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Prune2Q52KR3 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prune2Q52KR3 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC20.33■□□□□ 0.84
Prune2Q52KR3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Prune2Q52KR3 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.33■□□□□ 0.84
Prune2Q52KR3 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.33■□□□□ 0.84
Prune2Q52KR3 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prune2Q52KR3 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prune2Q52KR3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Prune2Q52KR3 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.32■□□□□ 0.84
Prune2Q52KR3 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Prune2Q52KR3 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Prune2Q52KR3 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC20.31■□□□□ 0.84
Prune2Q52KR3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Prune2Q52KR3 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms