Protein–RNA interactions for Protein: Q4VA53

Pds5b, Sister chromatid cohesion protein PDS5 homolog B, mousemouse

Known RBP Predictions only

Length 1,446 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5bQ4VA53 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC38.7■■■■□ 3.79
Pds5bQ4VA53 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC38.69■■■■□ 3.78
Pds5bQ4VA53 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC38.69■■■■□ 3.78
Pds5bQ4VA53 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC38.68■■■■□ 3.78
Pds5bQ4VA53 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
Pds5bQ4VA53 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Gm10849-201ENSMUST00000100397 618 ntBASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC38.66■■■■□ 3.78
Pds5bQ4VA53 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC38.65■■■■□ 3.78
Pds5bQ4VA53 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC38.65■■■■□ 3.78
Pds5bQ4VA53 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC38.64■■■■□ 3.78
Pds5bQ4VA53 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC38.63■■■■□ 3.78
Pds5bQ4VA53 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Pds5bQ4VA53 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.77
Pds5bQ4VA53 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC38.63■■■■□ 3.77
Pds5bQ4VA53 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC38.62■■■■□ 3.77
Pds5bQ4VA53 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC38.62■■■■□ 3.77
Pds5bQ4VA53 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Gm8493-201ENSMUST00000196881 489 ntBASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Gm43173-201ENSMUST00000202246 593 ntBASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.6■■■■□ 3.77
Pds5bQ4VA53 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC38.59■■■■□ 3.77
Pds5bQ4VA53 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC38.58■■■■□ 3.77
Pds5bQ4VA53 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC38.58■■■■□ 3.77
Pds5bQ4VA53 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC38.57■■■■□ 3.77
Pds5bQ4VA53 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
Pds5bQ4VA53 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC38.57■■■■□ 3.76
Pds5bQ4VA53 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.76
Pds5bQ4VA53 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC38.56■■■■□ 3.76
Pds5bQ4VA53 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Gm37179-201ENSMUST00000194862 823 ntBASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Wdr70-203ENSMUST00000227371 1130 ntBASIC38.55■■■■□ 3.76
Pds5bQ4VA53 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC38.54■■■■□ 3.76
Pds5bQ4VA53 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC38.54■■■■□ 3.76
Pds5bQ4VA53 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
Pds5bQ4VA53 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC38.53■■■■□ 3.76
Pds5bQ4VA53 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC38.53■■■■□ 3.76
Pds5bQ4VA53 CT025689.6-201ENSMUST00000224991 1104 ntBASIC38.53■■■■□ 3.76
Pds5bQ4VA53 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC38.52■■■■□ 3.76
Pds5bQ4VA53 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC38.52■■■■□ 3.76
Pds5bQ4VA53 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.51■■■■□ 3.76
Pds5bQ4VA53 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC38.51■■■■□ 3.76
Pds5bQ4VA53 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC38.51■■■■□ 3.76
Pds5bQ4VA53 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
Pds5bQ4VA53 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC38.5■■■■□ 3.75
Pds5bQ4VA53 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
Pds5bQ4VA53 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC38.49■■■■□ 3.75
Pds5bQ4VA53 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC38.49■■■■□ 3.75
Pds5bQ4VA53 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC38.48■■■■□ 3.75
Pds5bQ4VA53 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC38.48■■■■□ 3.75
Pds5bQ4VA53 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC38.48■■■■□ 3.75
Pds5bQ4VA53 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Pds5bQ4VA53 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
Pds5bQ4VA53 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC38.47■■■■□ 3.75
Pds5bQ4VA53 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC38.47■■■■□ 3.75
Pds5bQ4VA53 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Gm42569-201ENSMUST00000200539 472 ntBASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC38.46■■■■□ 3.75
Pds5bQ4VA53 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC38.45■■■■□ 3.75
Pds5bQ4VA53 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC38.45■■■■□ 3.75
Pds5bQ4VA53 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC38.45■■■■□ 3.75
Pds5bQ4VA53 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC38.44■■■■□ 3.74
Pds5bQ4VA53 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC38.44■■■■□ 3.74
Pds5bQ4VA53 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Pds5bQ4VA53 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
Pds5bQ4VA53 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC38.43■■■■□ 3.74
Pds5bQ4VA53 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC38.42■■■■□ 3.74
Pds5bQ4VA53 Gm9870-201ENSMUST00000063874 645 ntBASIC38.42■■■■□ 3.74
Pds5bQ4VA53 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC38.42■■■■□ 3.74
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms