Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Gm27454-201ENSMUST00000185090 204 ntBASIC32.18■■■□□ 2.74
Arhgef40Q3UPH7 Golgb1-201ENSMUST00000023534 498 ntBASIC32.17■■■□□ 2.74
Arhgef40Q3UPH7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Arhgef40Q3UPH7 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
Arhgef40Q3UPH7 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Arhgef40Q3UPH7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
Arhgef40Q3UPH7 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Arhgef40Q3UPH7 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
Arhgef40Q3UPH7 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Arhgef40Q3UPH7 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
Arhgef40Q3UPH7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC32.14■■■□□ 2.74
Arhgef40Q3UPH7 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Arhgef40Q3UPH7 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Arhgef40Q3UPH7 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
Arhgef40Q3UPH7 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC32.13■■■□□ 2.73
Arhgef40Q3UPH7 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Arhgef40Q3UPH7 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC32.11■■■□□ 2.73
Arhgef40Q3UPH7 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC32.11■■■□□ 2.73
Arhgef40Q3UPH7 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Gm45417-201ENSMUST00000209533 758 ntBASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC32.1■■■□□ 2.73
Arhgef40Q3UPH7 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Arhgef40Q3UPH7 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Arhgef40Q3UPH7 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
Arhgef40Q3UPH7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC32.09■■■□□ 2.73
Arhgef40Q3UPH7 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC32.09■■■□□ 2.73
Arhgef40Q3UPH7 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC32.08■■■□□ 2.73
Arhgef40Q3UPH7 Gm12821-201ENSMUST00000120022 600 ntBASIC32.07■■■□□ 2.72
Arhgef40Q3UPH7 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC32.07■■■□□ 2.72
Arhgef40Q3UPH7 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC32.06■■■□□ 2.72
Arhgef40Q3UPH7 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC32.06■■■□□ 2.72
Arhgef40Q3UPH7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Arhgef40Q3UPH7 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC32.06■■■□□ 2.72
Arhgef40Q3UPH7 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Arhgef40Q3UPH7 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC32.05■■■□□ 2.72
Arhgef40Q3UPH7 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
Arhgef40Q3UPH7 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Arhgef40Q3UPH7 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Arhgef40Q3UPH7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
Arhgef40Q3UPH7 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef40Q3UPH7 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef40Q3UPH7 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef40Q3UPH7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef40Q3UPH7 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
Arhgef40Q3UPH7 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC32.01■■■□□ 2.72
Arhgef40Q3UPH7 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC32.01■■■□□ 2.72
Arhgef40Q3UPH7 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
Arhgef40Q3UPH7 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC32■■■□□ 2.71
Arhgef40Q3UPH7 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
Arhgef40Q3UPH7 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC32■■■□□ 2.71
Arhgef40Q3UPH7 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC32■■■□□ 2.71
Arhgef40Q3UPH7 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
Arhgef40Q3UPH7 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC31.98■■■□□ 2.71
Arhgef40Q3UPH7 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC31.98■■■□□ 2.71
Arhgef40Q3UPH7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC31.98■■■□□ 2.71
Arhgef40Q3UPH7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Arhgef40Q3UPH7 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
Arhgef40Q3UPH7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC31.97■■■□□ 2.71
Arhgef40Q3UPH7 AC158990.1-201ENSMUST00000221450 2016 ntBASIC31.96■■■□□ 2.71
Arhgef40Q3UPH7 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Arhgef40Q3UPH7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Arhgef40Q3UPH7 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
Arhgef40Q3UPH7 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC31.96■■■□□ 2.71
Arhgef40Q3UPH7 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC31.95■■■□□ 2.71
Arhgef40Q3UPH7 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.71
Arhgef40Q3UPH7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
Arhgef40Q3UPH7 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
Arhgef40Q3UPH7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC31.95■■■□□ 2.7
Arhgef40Q3UPH7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC31.95■■■□□ 2.7
Arhgef40Q3UPH7 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
Arhgef40Q3UPH7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms