Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Cln6Q3U466 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cln6Q3U466 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln6Q3U466 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln6Q3U466 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln6Q3U466 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cln6Q3U466 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.03■□□□□ 0.48
Cln6Q3U466 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cln6Q3U466 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.03■□□□□ 0.48
Cln6Q3U466 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC18.03■□□□□ 0.48
Cln6Q3U466 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
Cln6Q3U466 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cln6Q3U466 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cln6Q3U466 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cln6Q3U466 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cln6Q3U466 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC18.02■□□□□ 0.47
Cln6Q3U466 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Cln6Q3U466 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
Cln6Q3U466 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Notumos-201ENSMUST00000151998 2659 ntBASIC18.01■□□□□ 0.47
Cln6Q3U466 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Cln6Q3U466 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln6Q3U466 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
Cln6Q3U466 Gm6311-201ENSMUST00000073790 878 ntBASIC18■□□□□ 0.47
Cln6Q3U466 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Cln6Q3U466 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln6Q3U466 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln6Q3U466 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Cln6Q3U466 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Cln6Q3U466 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC17.99■□□□□ 0.47
Cln6Q3U466 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cln6Q3U466 Gm44428-201ENSMUST00000204474 874 ntBASIC17.99■□□□□ 0.47
Cln6Q3U466 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Cln6Q3U466 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.98■□□□□ 0.47
Cln6Q3U466 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Cln6Q3U466 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
Cln6Q3U466 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cln6Q3U466 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cln6Q3U466 AC115037.1-201ENSMUST00000223391 2173 ntBASIC17.97■□□□□ 0.47
Cln6Q3U466 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cln6Q3U466 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Cln6Q3U466 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Cln6Q3U466 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Cln6Q3U466 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cln6Q3U466 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cln6Q3U466 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Cln6Q3U466 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.95■□□□□ 0.46
Cln6Q3U466 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.95■□□□□ 0.46
Cln6Q3U466 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.95■□□□□ 0.46
Cln6Q3U466 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.95■□□□□ 0.46
Cln6Q3U466 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Cln6Q3U466 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
Cln6Q3U466 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.94■□□□□ 0.46
Cln6Q3U466 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.94■□□□□ 0.46
Cln6Q3U466 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.94■□□□□ 0.46
Cln6Q3U466 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cln6Q3U466 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cln6Q3U466 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC17.93■□□□□ 0.46
Cln6Q3U466 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cln6Q3U466 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cln6Q3U466 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cln6Q3U466 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cln6Q3U466 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cln6Q3U466 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cln6Q3U466 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms