Protein–RNA interactions for Protein: Q3TR08

Fndc4, Fibronectin type III domain-containing protein 4, mousemouse

Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fndc4Q3TR08 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Fndc4Q3TR08 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 AC153524.1-201ENSMUST00000220436 1935 ntBASIC18.02■□□□□ 0.48
Fndc4Q3TR08 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 Gm11175-201ENSMUST00000116172 543 ntBASIC18.02■□□□□ 0.48
Fndc4Q3TR08 Gm28731-201ENSMUST00000185564 1569 ntBASIC18.02■□□□□ 0.48
Fndc4Q3TR08 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Fndc4Q3TR08 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fndc4Q3TR08 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.47
Fndc4Q3TR08 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.01■□□□□ 0.47
Fndc4Q3TR08 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Fndc4Q3TR08 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fndc4Q3TR08 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Fndc4Q3TR08 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Fndc4Q3TR08 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Fndc4Q3TR08 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fndc4Q3TR08 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC18■□□□□ 0.47
Fndc4Q3TR08 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC18■□□□□ 0.47
Fndc4Q3TR08 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Fndc4Q3TR08 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
Fndc4Q3TR08 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Fndc4Q3TR08 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Fndc4Q3TR08 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Mir6538-201ENSMUST00000183713 110 ntBASIC17.96■□□□□ 0.47
Fndc4Q3TR08 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Fndc4Q3TR08 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Gm44428-201ENSMUST00000204474 874 ntBASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Fndc4Q3TR08 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fndc4Q3TR08 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Fndc4Q3TR08 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Fndc4Q3TR08 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fndc4Q3TR08 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.93■□□□□ 0.46
Fndc4Q3TR08 AC153962.1-201ENSMUST00000218530 1948 ntBASIC17.93■□□□□ 0.46
Fndc4Q3TR08 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fndc4Q3TR08 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fndc4Q3TR08 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Fndc4Q3TR08 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Fndc4Q3TR08 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fndc4Q3TR08 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fndc4Q3TR08 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Fndc4Q3TR08 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.91■□□□□ 0.46
Fndc4Q3TR08 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Fndc4Q3TR08 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Fndc4Q3TR08 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Fndc4Q3TR08 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms