Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC11.97□□□□□ -0.49
Ush2AQ2QI47 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ush2AQ2QI47 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Ush2AQ2QI47 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Gm10399-202ENSMUST00000202768 748 ntBASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Gm10033-202ENSMUST00000211874 928 ntBASIC11.96□□□□□ -0.49
Ush2AQ2QI47 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Cdc34b-202ENSMUST00000188741 1252 ntBASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Gm43173-201ENSMUST00000202246 593 ntBASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Ush2AQ2QI47 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Gm28536-201ENSMUST00000190971 1317 ntBASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Ush2AQ2QI47 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Ush2AQ2QI47 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Gm8093-201ENSMUST00000128935 1892 ntBASIC11.93□□□□□ -0.5
Ush2AQ2QI47 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Gm22240-201ENSMUST00000175225 82 ntBASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC11.92□□□□□ -0.5
Ush2AQ2QI47 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.91□□□□□ -0.5
Ush2AQ2QI47 Gm4419-202ENSMUST00000226239 1431 ntBASIC11.91□□□□□ -0.5
Ush2AQ2QI47 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Ush2AQ2QI47 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Ush2AQ2QI47 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Gm43060-201ENSMUST00000200621 289 ntBASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ush2AQ2QI47 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Gm12933-201ENSMUST00000120203 872 ntBASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Ush2AQ2QI47 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Ush2AQ2QI47 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC11.9□□□□□ -0.51
Ush2AQ2QI47 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC11.89□□□□□ -0.51
Ush2AQ2QI47 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Gm12251-201ENSMUST00000117893 792 ntBASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Ush2AQ2QI47 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Ush2AQ2QI47 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ush2AQ2QI47 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Ush2AQ2QI47 Gm10657-201ENSMUST00000193528 1031 ntBASIC11.86□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms