Protein–RNA interactions for Protein: P97357

Taf1a, TATA box-binding protein-associated factor RNA polymerase I subunit A, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Taf1aP97357 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Taf1aP97357 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Taf1aP97357 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.61■□□□□ 0.73
Taf1aP97357 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.61■□□□□ 0.73
Taf1aP97357 Gm6311-201ENSMUST00000073790 878 ntBASIC19.61■□□□□ 0.73
Taf1aP97357 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Taf1aP97357 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Taf1aP97357 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Taf1aP97357 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Taf1aP97357 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Taf1aP97357 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Taf1aP97357 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Taf1aP97357 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Taf1aP97357 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Taf1aP97357 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Taf1aP97357 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Taf1aP97357 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Taf1aP97357 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Taf1aP97357 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Taf1aP97357 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Taf1aP97357 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Taf1aP97357 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Taf1aP97357 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Taf1aP97357 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.57■□□□□ 0.72
Taf1aP97357 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Taf1aP97357 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Taf1aP97357 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Taf1aP97357 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Taf1aP97357 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC19.56■□□□□ 0.72
Taf1aP97357 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.56■□□□□ 0.72
Taf1aP97357 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Taf1aP97357 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Taf1aP97357 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Taf1aP97357 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Taf1aP97357 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Taf1aP97357 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
Taf1aP97357 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Taf1aP97357 Mir6538-201ENSMUST00000183713 110 ntBASIC19.55■□□□□ 0.72
Taf1aP97357 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.55■□□□□ 0.72
Taf1aP97357 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Taf1aP97357 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
Taf1aP97357 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Taf1aP97357 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Taf1aP97357 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Taf1aP97357 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Taf1aP97357 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.54■□□□□ 0.72
Taf1aP97357 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Taf1aP97357 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Taf1aP97357 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Taf1aP97357 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Taf1aP97357 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Taf1aP97357 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Taf1aP97357 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Taf1aP97357 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.52■□□□□ 0.72
Taf1aP97357 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Taf1aP97357 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Taf1aP97357 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Taf1aP97357 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Taf1aP97357 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Taf1aP97357 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.51■□□□□ 0.71
Taf1aP97357 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Taf1aP97357 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Taf1aP97357 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC19.5■□□□□ 0.71
Taf1aP97357 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Taf1aP97357 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.49■□□□□ 0.71
Taf1aP97357 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC19.49■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms