Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcaP82350 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
SgcaP82350 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
SgcaP82350 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
SgcaP82350 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcaP82350 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcaP82350 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
SgcaP82350 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcaP82350 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
SgcaP82350 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
SgcaP82350 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC17.71■□□□□ 0.43
SgcaP82350 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
SgcaP82350 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
SgcaP82350 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC17.7■□□□□ 0.42
SgcaP82350 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.7■□□□□ 0.42
SgcaP82350 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
SgcaP82350 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcaP82350 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.69■□□□□ 0.42
SgcaP82350 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC17.69■□□□□ 0.42
SgcaP82350 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
SgcaP82350 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcaP82350 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
SgcaP82350 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SgcaP82350 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
SgcaP82350 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
SgcaP82350 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
SgcaP82350 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC17.67■□□□□ 0.42
SgcaP82350 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SgcaP82350 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC17.66■□□□□ 0.42
SgcaP82350 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SgcaP82350 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.65■□□□□ 0.42
SgcaP82350 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC17.65■□□□□ 0.42
SgcaP82350 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SgcaP82350 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SgcaP82350 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC17.65■□□□□ 0.42
SgcaP82350 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
SgcaP82350 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC17.64■□□□□ 0.42
SgcaP82350 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
SgcaP82350 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Gm10616-201ENSMUST00000205285 2127 ntBASIC17.64■□□□□ 0.41
SgcaP82350 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC17.64■□□□□ 0.41
SgcaP82350 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SgcaP82350 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SgcaP82350 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.64■□□□□ 0.41
SgcaP82350 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.64■□□□□ 0.41
SgcaP82350 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcaP82350 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcaP82350 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SgcaP82350 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SgcaP82350 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC17.63■□□□□ 0.41
SgcaP82350 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SgcaP82350 Gm4799-201ENSMUST00000095396 657 ntBASIC17.63■□□□□ 0.41
SgcaP82350 Gm13889-201ENSMUST00000099689 1386 ntBASIC17.63■□□□□ 0.41
SgcaP82350 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.63■□□□□ 0.41
SgcaP82350 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
SgcaP82350 Gm7199-201ENSMUST00000118327 1485 ntBASIC17.63■□□□□ 0.41
SgcaP82350 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
SgcaP82350 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
SgcaP82350 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SgcaP82350 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms