Protein–RNA interactions for Protein: P70658

Cxcr4, C-X-C chemokine receptor type 4, mousemouse

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr4P70658 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcr4P70658 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cxcr4P70658 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.92■□□□□ 0.78
Cxcr4P70658 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cxcr4P70658 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cxcr4P70658 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cxcr4P70658 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.91■□□□□ 0.78
Cxcr4P70658 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcr4P70658 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cxcr4P70658 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cxcr4P70658 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcr4P70658 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcr4P70658 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Cxcr4P70658 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cxcr4P70658 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcr4P70658 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cxcr4P70658 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cxcr4P70658 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cxcr4P70658 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcr4P70658 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.89■□□□□ 0.77
Cxcr4P70658 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcr4P70658 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcr4P70658 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcr4P70658 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cxcr4P70658 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cxcr4P70658 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.89■□□□□ 0.77
Cxcr4P70658 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.88■□□□□ 0.77
Cxcr4P70658 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcr4P70658 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cxcr4P70658 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.88■□□□□ 0.77
Cxcr4P70658 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.88■□□□□ 0.77
Cxcr4P70658 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cxcr4P70658 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Cxcr4P70658 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.87■□□□□ 0.77
Cxcr4P70658 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cxcr4P70658 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcr4P70658 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cxcr4P70658 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Cxcr4P70658 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcr4P70658 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cxcr4P70658 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcr4P70658 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cxcr4P70658 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcr4P70658 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cxcr4P70658 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcr4P70658 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Cxcr4P70658 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Cxcr4P70658 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcr4P70658 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Cxcr4P70658 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cxcr4P70658 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.84■□□□□ 0.77
Cxcr4P70658 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cxcr4P70658 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
Cxcr4P70658 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcr4P70658 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cxcr4P70658 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
Cxcr4P70658 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cxcr4P70658 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cxcr4P70658 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcr4P70658 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcr4P70658 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Cxcr4P70658 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cxcr4P70658 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.81■□□□□ 0.76
Cxcr4P70658 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.81■□□□□ 0.76
Cxcr4P70658 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.81■□□□□ 0.76
Cxcr4P70658 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cxcr4P70658 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.81■□□□□ 0.76
Cxcr4P70658 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cxcr4P70658 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cxcr4P70658 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcr4P70658 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcr4P70658 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcr4P70658 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.8■□□□□ 0.76
Cxcr4P70658 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcr4P70658 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cxcr4P70658 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cxcr4P70658 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cxcr4P70658 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.79■□□□□ 0.76
Cxcr4P70658 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Cxcr4P70658 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms