Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crnkl1P63154 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crnkl1P63154 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Crnkl1P63154 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crnkl1P63154 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Crnkl1P63154 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
Crnkl1P63154 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.9■□□□□ 0.94
Crnkl1P63154 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Gm4799-201ENSMUST00000095396 657 ntBASIC20.9■□□□□ 0.94
Crnkl1P63154 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Crnkl1P63154 Gm22567-201ENSMUST00000175542 342 ntBASIC20.89■□□□□ 0.93
Crnkl1P63154 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.89■□□□□ 0.93
Crnkl1P63154 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.89■□□□□ 0.93
Crnkl1P63154 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.89■□□□□ 0.93
Crnkl1P63154 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Crnkl1P63154 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
Crnkl1P63154 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Crnkl1P63154 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crnkl1P63154 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Crnkl1P63154 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crnkl1P63154 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.88■□□□□ 0.93
Crnkl1P63154 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crnkl1P63154 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crnkl1P63154 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Crnkl1P63154 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Crnkl1P63154 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crnkl1P63154 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Crnkl1P63154 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Crnkl1P63154 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Crnkl1P63154 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.86■□□□□ 0.93
Crnkl1P63154 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.86■□□□□ 0.93
Crnkl1P63154 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Crnkl1P63154 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Crnkl1P63154 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.85■□□□□ 0.93
Crnkl1P63154 Gm6311-201ENSMUST00000073790 878 ntBASIC20.85■□□□□ 0.93
Crnkl1P63154 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Crnkl1P63154 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Crnkl1P63154 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crnkl1P63154 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crnkl1P63154 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Crnkl1P63154 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crnkl1P63154 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crnkl1P63154 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Crnkl1P63154 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Crnkl1P63154 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crnkl1P63154 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crnkl1P63154 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.83■□□□□ 0.93
Crnkl1P63154 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Crnkl1P63154 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crnkl1P63154 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Crnkl1P63154 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Crnkl1P63154 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Crnkl1P63154 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Crnkl1P63154 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Crnkl1P63154 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.81■□□□□ 0.92
Crnkl1P63154 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crnkl1P63154 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crnkl1P63154 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Crnkl1P63154 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.81■□□□□ 0.92
Crnkl1P63154 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Crnkl1P63154 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
Crnkl1P63154 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Crnkl1P63154 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Crnkl1P63154 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crnkl1P63154 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Crnkl1P63154 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Crnkl1P63154 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.78■□□□□ 0.92
Crnkl1P63154 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crnkl1P63154 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC20.78■□□□□ 0.92
Crnkl1P63154 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.78■□□□□ 0.92
Crnkl1P63154 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crnkl1P63154 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.78■□□□□ 0.92
Crnkl1P63154 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Crnkl1P63154 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms