Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Ybx1P62960 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC22.03■■□□□ 1.12
Ybx1P62960 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ybx1P62960 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ybx1P62960 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ybx1P62960 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ybx1P62960 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Ybx1P62960 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ybx1P62960 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
Ybx1P62960 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ybx1P62960 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Ybx1P62960 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Ybx1P62960 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
Ybx1P62960 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
Ybx1P62960 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.01■■□□□ 1.11
Ybx1P62960 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Ybx1P62960 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC22.01■■□□□ 1.11
Ybx1P62960 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC22.01■■□□□ 1.11
Ybx1P62960 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Ybx1P62960 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ybx1P62960 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22■■□□□ 1.11
Ybx1P62960 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
Ybx1P62960 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22■■□□□ 1.11
Ybx1P62960 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
Ybx1P62960 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22■■□□□ 1.11
Ybx1P62960 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC22■■□□□ 1.11
Ybx1P62960 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Ybx1P62960 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ybx1P62960 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ybx1P62960 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Ybx1P62960 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ybx1P62960 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ybx1P62960 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ybx1P62960 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Ybx1P62960 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Ybx1P62960 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ybx1P62960 Gm6934-201ENSMUST00000194780 1905 ntBASIC21.98■■□□□ 1.11
Ybx1P62960 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ybx1P62960 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.98■■□□□ 1.11
Ybx1P62960 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Ybx1P62960 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC21.98■■□□□ 1.11
Ybx1P62960 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC21.97■■□□□ 1.11
Ybx1P62960 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.97■■□□□ 1.11
Ybx1P62960 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC21.97■■□□□ 1.11
Ybx1P62960 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Ybx1P62960 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Ybx1P62960 Gm12922-201ENSMUST00000120626 809 ntBASIC21.96■■□□□ 1.11
Ybx1P62960 AC140930.3-201ENSMUST00000222935 274 ntBASIC21.96■■□□□ 1.11
Ybx1P62960 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Ybx1P62960 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC21.95■■□□□ 1.1
Ybx1P62960 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.95■■□□□ 1.1
Ybx1P62960 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.94■■□□□ 1.1
Ybx1P62960 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
Ybx1P62960 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC21.94■■□□□ 1.1
Ybx1P62960 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ybx1P62960 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
Ybx1P62960 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Ybx1P62960 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.94■■□□□ 1.1
Ybx1P62960 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ybx1P62960 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Ybx1P62960 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ybx1P62960 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ybx1P62960 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Ybx1P62960 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Ybx1P62960 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ybx1P62960 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ybx1P62960 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC21.92■■□□□ 1.1
Ybx1P62960 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Ybx1P62960 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.91■■□□□ 1.1
Ybx1P62960 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ybx1P62960 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.91■■□□□ 1.1
Ybx1P62960 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ybx1P62960 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Ybx1P62960 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.9■■□□□ 1.1
Ybx1P62960 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
Ybx1P62960 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC21.9■■□□□ 1.1
Ybx1P62960 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.9■■□□□ 1.1
Ybx1P62960 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Ybx1P62960 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Ybx1P62960 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ybx1P62960 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Ybx1P62960 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms