Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b6P59708 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b6P59708 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3b6P59708 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Sf3b6P59708 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.88■□□□□ 0.61
Sf3b6P59708 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Mir3960-201ENSMUST00000198213 73 ntBASIC18.88■□□□□ 0.61
Sf3b6P59708 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3b6P59708 AC167019.3-201ENSMUST00000228225 1266 ntBASIC18.88■□□□□ 0.61
Sf3b6P59708 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3b6P59708 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b6P59708 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Sf3b6P59708 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b6P59708 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Sf3b6P59708 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3b6P59708 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC18.86■□□□□ 0.61
Sf3b6P59708 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b6P59708 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Sf3b6P59708 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b6P59708 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3b6P59708 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Sf3b6P59708 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sf3b6P59708 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Sf3b6P59708 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b6P59708 Gm45364-201ENSMUST00000210883 159 ntBASIC18.85■□□□□ 0.61
Sf3b6P59708 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b6P59708 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sf3b6P59708 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Sf3b6P59708 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sf3b6P59708 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b6P59708 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b6P59708 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
Sf3b6P59708 Gm6311-201ENSMUST00000073790 878 ntBASIC18.83■□□□□ 0.6
Sf3b6P59708 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b6P59708 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b6P59708 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sf3b6P59708 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Sf3b6P59708 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b6P59708 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b6P59708 AC154454.1-201ENSMUST00000225253 216 ntBASIC18.82■□□□□ 0.6
Sf3b6P59708 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sf3b6P59708 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
Sf3b6P59708 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Sf3b6P59708 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Sf3b6P59708 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b6P59708 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b6P59708 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.81■□□□□ 0.6
Sf3b6P59708 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sf3b6P59708 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC18.81■□□□□ 0.6
Sf3b6P59708 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sf3b6P59708 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sf3b6P59708 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sf3b6P59708 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.8■□□□□ 0.6
Sf3b6P59708 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC18.79■□□□□ 0.6
Sf3b6P59708 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b6P59708 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b6P59708 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b6P59708 Gm4430-201ENSMUST00000192413 1943 ntBASIC18.79■□□□□ 0.6
Sf3b6P59708 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b6P59708 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Sf3b6P59708 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.78■□□□□ 0.6
Sf3b6P59708 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sf3b6P59708 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b6P59708 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Sf3b6P59708 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b6P59708 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b6P59708 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sf3b6P59708 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Sf3b6P59708 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sf3b6P59708 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b6P59708 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Sf3b6P59708 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC18.76■□□□□ 0.59
Sf3b6P59708 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC18.76■□□□□ 0.59
Sf3b6P59708 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC18.76■□□□□ 0.59
Sf3b6P59708 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sf3b6P59708 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b6P59708 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sf3b6P59708 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC18.75■□□□□ 0.59
Sf3b6P59708 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC18.75■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms