Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Sssca1P56873 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Sssca1P56873 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.16■□□□□ 0.34
Sssca1P56873 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sssca1P56873 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Sssca1P56873 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Sssca1P56873 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sssca1P56873 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sssca1P56873 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.15■□□□□ 0.34
Sssca1P56873 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sssca1P56873 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sssca1P56873 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.15■□□□□ 0.34
Sssca1P56873 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Sssca1P56873 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.14■□□□□ 0.33
Sssca1P56873 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Sssca1P56873 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sssca1P56873 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Sssca1P56873 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Sssca1P56873 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.13■□□□□ 0.33
Sssca1P56873 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sssca1P56873 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sssca1P56873 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sssca1P56873 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sssca1P56873 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Sssca1P56873 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Sssca1P56873 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Sssca1P56873 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
Sssca1P56873 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Sssca1P56873 Gm44428-201ENSMUST00000204474 874 ntBASIC17.12■□□□□ 0.33
Sssca1P56873 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Sssca1P56873 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.11■□□□□ 0.33
Sssca1P56873 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Sssca1P56873 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Sssca1P56873 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Sssca1P56873 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.1■□□□□ 0.33
Sssca1P56873 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.1■□□□□ 0.33
Sssca1P56873 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.1■□□□□ 0.33
Sssca1P56873 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Sssca1P56873 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Sssca1P56873 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sssca1P56873 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sssca1P56873 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.09■□□□□ 0.33
Sssca1P56873 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Sssca1P56873 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sssca1P56873 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sssca1P56873 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Sssca1P56873 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sssca1P56873 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Sssca1P56873 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.08■□□□□ 0.32
Sssca1P56873 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Sssca1P56873 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Sssca1P56873 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Sssca1P56873 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
Sssca1P56873 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.07■□□□□ 0.32
Sssca1P56873 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.07■□□□□ 0.32
Sssca1P56873 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.07■□□□□ 0.32
Sssca1P56873 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.07■□□□□ 0.32
Sssca1P56873 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Sssca1P56873 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
Sssca1P56873 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Sssca1P56873 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.06■□□□□ 0.32
Sssca1P56873 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.06■□□□□ 0.32
Sssca1P56873 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Sssca1P56873 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
Sssca1P56873 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Sssca1P56873 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Sssca1P56873 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Sssca1P56873 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sssca1P56873 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Sssca1P56873 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sssca1P56873 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sssca1P56873 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Sssca1P56873 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms