Protein–RNA interactions for Protein: P54869

Hmgcs2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, mousemouse

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs2P54869 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Hmgcs2P54869 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC24.04■■□□□ 1.44
Hmgcs2P54869 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Hmgcs2P54869 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs2P54869 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs2P54869 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs2P54869 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Hmgcs2P54869 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.02■■□□□ 1.44
Hmgcs2P54869 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC24.02■■□□□ 1.44
Hmgcs2P54869 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Golgb1-201ENSMUST00000023534 498 ntBASIC24.02■■□□□ 1.44
Hmgcs2P54869 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Hmgcs2P54869 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Hmgcs2P54869 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Hmgcs2P54869 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC24.01■■□□□ 1.43
Hmgcs2P54869 Gm12821-201ENSMUST00000120022 600 ntBASIC24.01■■□□□ 1.43
Hmgcs2P54869 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC24.01■■□□□ 1.43
Hmgcs2P54869 Gm27454-201ENSMUST00000185090 204 ntBASIC24.01■■□□□ 1.43
Hmgcs2P54869 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC24■■□□□ 1.43
Hmgcs2P54869 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC24■■□□□ 1.43
Hmgcs2P54869 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Hmgcs2P54869 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC24■■□□□ 1.43
Hmgcs2P54869 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC24■■□□□ 1.43
Hmgcs2P54869 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Hmgcs2P54869 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC23.99■■□□□ 1.43
Hmgcs2P54869 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
Hmgcs2P54869 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Hmgcs2P54869 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs2P54869 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs2P54869 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs2P54869 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Hmgcs2P54869 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Hmgcs2P54869 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Hmgcs2P54869 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Hmgcs2P54869 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Hmgcs2P54869 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC23.97■■□□□ 1.43
Hmgcs2P54869 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs2P54869 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs2P54869 Gm45417-201ENSMUST00000209533 758 ntBASIC23.96■■□□□ 1.43
Hmgcs2P54869 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs2P54869 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs2P54869 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Hmgcs2P54869 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.43
Hmgcs2P54869 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC23.95■■□□□ 1.42
Hmgcs2P54869 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.42
Hmgcs2P54869 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hmgcs2P54869 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.95■■□□□ 1.42
Hmgcs2P54869 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC23.94■■□□□ 1.42
Hmgcs2P54869 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Hmgcs2P54869 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hmgcs2P54869 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.93■■□□□ 1.42
Hmgcs2P54869 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Hmgcs2P54869 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Hmgcs2P54869 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hmgcs2P54869 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Hmgcs2P54869 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.91■■□□□ 1.42
Hmgcs2P54869 Serp2-204ENSMUST00000228055 705 ntBASIC23.91■■□□□ 1.42
Hmgcs2P54869 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.9■■□□□ 1.42
Hmgcs2P54869 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hmgcs2P54869 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Hmgcs2P54869 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Hmgcs2P54869 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC23.89■■□□□ 1.41
Hmgcs2P54869 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.41
Hmgcs2P54869 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgcs2P54869 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgcs2P54869 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Hmgcs2P54869 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Hmgcs2P54869 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.88■■□□□ 1.41
Hmgcs2P54869 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgcs2P54869 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC23.87■■□□□ 1.41
Hmgcs2P54869 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC23.87■■□□□ 1.41
Hmgcs2P54869 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Hmgcs2P54869 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgcs2P54869 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.86■■□□□ 1.41
Hmgcs2P54869 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgcs2P54869 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.86■■□□□ 1.41
Hmgcs2P54869 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Hmgcs2P54869 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms