Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Atxn1P54254 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atxn1P54254 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
Atxn1P54254 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atxn1P54254 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atxn1P54254 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC21.11■□□□□ 0.97
Atxn1P54254 Spcs1-207ENSMUST00000228767 1008 ntBASIC21.11■□□□□ 0.97
Atxn1P54254 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Atxn1P54254 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Atxn1P54254 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Atxn1P54254 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC21.1■□□□□ 0.97
Atxn1P54254 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Atxn1P54254 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Atxn1P54254 Golgb1-201ENSMUST00000023534 498 ntBASIC21.1■□□□□ 0.97
Atxn1P54254 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
Atxn1P54254 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Atxn1P54254 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atxn1P54254 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Atxn1P54254 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Atxn1P54254 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atxn1P54254 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
Atxn1P54254 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.08■□□□□ 0.97
Atxn1P54254 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atxn1P54254 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atxn1P54254 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Atxn1P54254 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atxn1P54254 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atxn1P54254 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Atxn1P54254 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atxn1P54254 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Atxn1P54254 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Atxn1P54254 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Atxn1P54254 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Atxn1P54254 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.06■□□□□ 0.96
Atxn1P54254 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atxn1P54254 March5-201ENSMUST00000024078 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atxn1P54254 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.06■□□□□ 0.96
Atxn1P54254 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC21.06■□□□□ 0.96
Atxn1P54254 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Atxn1P54254 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Atxn1P54254 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atxn1P54254 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Atxn1P54254 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Atxn1P54254 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Atxn1P54254 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 AC164629.5-201ENSMUST00000220387 632 ntBASIC21.05■□□□□ 0.96
Atxn1P54254 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Atxn1P54254 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
Atxn1P54254 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atxn1P54254 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atxn1P54254 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
Atxn1P54254 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Atxn1P54254 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Atxn1P54254 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.04■□□□□ 0.96
Atxn1P54254 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Atxn1P54254 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.04■□□□□ 0.96
Atxn1P54254 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atxn1P54254 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC21.03■□□□□ 0.96
Atxn1P54254 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atxn1P54254 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Atxn1P54254 Gm28731-201ENSMUST00000185564 1569 ntBASIC21.02■□□□□ 0.96
Atxn1P54254 Gm7199-201ENSMUST00000118327 1485 ntBASIC21.02■□□□□ 0.96
Atxn1P54254 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Atxn1P54254 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC21.02■□□□□ 0.96
Atxn1P54254 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atxn1P54254 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atxn1P54254 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC21.02■□□□□ 0.96
Atxn1P54254 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.02■□□□□ 0.96
Atxn1P54254 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Atxn1P54254 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.02■□□□□ 0.96
Atxn1P54254 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Atxn1P54254 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Atxn1P54254 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC21.01■□□□□ 0.95
Atxn1P54254 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC21.01■□□□□ 0.95
Atxn1P54254 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Atxn1P54254 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Atxn1P54254 Adgrb1-202ENSMUST00000170845 2704 ntTSL 5 BASIC21.01■□□□□ 0.95
Atxn1P54254 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Atxn1P54254 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atxn1P54254 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC21■□□□□ 0.95
Atxn1P54254 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC21■□□□□ 0.95
Atxn1P54254 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21■□□□□ 0.95
Atxn1P54254 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Atxn1P54254 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Atxn1P54254 AC164433.2-201ENSMUST00000226346 1701 ntBASIC21■□□□□ 0.95
Atxn1P54254 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Atxn1P54254 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms