Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.46■□□□□ 0.87
Rph3aP47708 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.46■□□□□ 0.87
Rph3aP47708 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.46■□□□□ 0.87
Rph3aP47708 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.46■□□□□ 0.87
Rph3aP47708 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rph3aP47708 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rph3aP47708 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Rph3aP47708 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rph3aP47708 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rph3aP47708 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Rph3aP47708 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.45■□□□□ 0.86
Rph3aP47708 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
Rph3aP47708 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rph3aP47708 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.45■□□□□ 0.86
Rph3aP47708 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rph3aP47708 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rph3aP47708 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.44■□□□□ 0.86
Rph3aP47708 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.44■□□□□ 0.86
Rph3aP47708 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.44■□□□□ 0.86
Rph3aP47708 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.44■□□□□ 0.86
Rph3aP47708 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rph3aP47708 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rph3aP47708 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Rph3aP47708 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC20.43■□□□□ 0.86
Rph3aP47708 Gm5921-201ENSMUST00000075898 882 ntBASIC20.43■□□□□ 0.86
Rph3aP47708 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rph3aP47708 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rph3aP47708 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rph3aP47708 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rph3aP47708 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.42■□□□□ 0.86
Rph3aP47708 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.42■□□□□ 0.86
Rph3aP47708 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rph3aP47708 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rph3aP47708 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Rph3aP47708 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.41■□□□□ 0.86
Rph3aP47708 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Rph3aP47708 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rph3aP47708 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.4■□□□□ 0.86
Rph3aP47708 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rph3aP47708 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rph3aP47708 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rph3aP47708 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rph3aP47708 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rph3aP47708 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.39■□□□□ 0.86
Rph3aP47708 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rph3aP47708 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rph3aP47708 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rph3aP47708 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rph3aP47708 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rph3aP47708 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rph3aP47708 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rph3aP47708 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
Rph3aP47708 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rph3aP47708 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.39■□□□□ 0.85
Rph3aP47708 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Rph3aP47708 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.38■□□□□ 0.85
Rph3aP47708 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rph3aP47708 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.38■□□□□ 0.85
Rph3aP47708 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Gm45444-201ENSMUST00000211394 898 ntBASIC20.38■□□□□ 0.85
Rph3aP47708 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Rph3aP47708 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rph3aP47708 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rph3aP47708 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rph3aP47708 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Rph3aP47708 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rph3aP47708 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rph3aP47708 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rph3aP47708 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.37■□□□□ 0.85
Rph3aP47708 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rph3aP47708 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rph3aP47708 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.36■□□□□ 0.85
Rph3aP47708 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.36■□□□□ 0.85
Rph3aP47708 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.36■□□□□ 0.85
Rph3aP47708 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms