Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.55■□□□□ 0.4
Hmx3P42581 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.55■□□□□ 0.4
Hmx3P42581 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Hmx3P42581 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmx3P42581 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmx3P42581 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.54■□□□□ 0.4
Hmx3P42581 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmx3P42581 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hmx3P42581 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.54■□□□□ 0.4
Hmx3P42581 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmx3P42581 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hmx3P42581 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
Hmx3P42581 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmx3P42581 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmx3P42581 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmx3P42581 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hmx3P42581 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmx3P42581 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.52■□□□□ 0.4
Hmx3P42581 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC17.52■□□□□ 0.4
Hmx3P42581 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hmx3P42581 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Hmx3P42581 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
Hmx3P42581 AC167019.3-201ENSMUST00000228225 1266 ntBASIC17.52■□□□□ 0.4
Hmx3P42581 Gm9812-201ENSMUST00000061934 968 ntBASIC17.52■□□□□ 0.4
Hmx3P42581 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmx3P42581 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmx3P42581 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hmx3P42581 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmx3P42581 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hmx3P42581 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC17.51■□□□□ 0.39
Hmx3P42581 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC17.51■□□□□ 0.39
Hmx3P42581 AC122317.2-201ENSMUST00000218708 1248 ntBASIC17.51■□□□□ 0.39
Hmx3P42581 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hmx3P42581 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.5■□□□□ 0.39
Hmx3P42581 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hmx3P42581 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Hmx3P42581 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC17.49■□□□□ 0.39
Hmx3P42581 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmx3P42581 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.49■□□□□ 0.39
Hmx3P42581 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hmx3P42581 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmx3P42581 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hmx3P42581 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmx3P42581 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hmx3P42581 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmx3P42581 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hmx3P42581 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC17.48■□□□□ 0.39
Hmx3P42581 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmx3P42581 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hmx3P42581 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmx3P42581 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmx3P42581 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.47■□□□□ 0.39
Hmx3P42581 AC153911.1-201ENSMUST00000220378 758 ntBASIC17.47■□□□□ 0.39
Hmx3P42581 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.47■□□□□ 0.39
Hmx3P42581 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Hmx3P42581 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Hmx3P42581 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Hmx3P42581 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.46■□□□□ 0.39
Hmx3P42581 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Hmx3P42581 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC17.46■□□□□ 0.39
Hmx3P42581 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.46■□□□□ 0.39
Hmx3P42581 Coq2-201ENSMUST00000031262 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Hmx3P42581 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.46■□□□□ 0.38
Hmx3P42581 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC17.45■□□□□ 0.38
Hmx3P42581 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
Hmx3P42581 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Hmx3P42581 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.45■□□□□ 0.38
Hmx3P42581 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Hmx3P42581 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC17.45■□□□□ 0.38
Hmx3P42581 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Hmx3P42581 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Hmx3P42581 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms