Protein–RNA interactions for Protein: P40646

Sox7, Transcription factor SOX-7, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox7P40646 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox7P40646 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Sox7P40646 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Sox7P40646 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Sox7P40646 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Sox7P40646 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox7P40646 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox7P40646 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Sox7P40646 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Sox7P40646 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox7P40646 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox7P40646 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox7P40646 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Sox7P40646 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Sox7P40646 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Sox7P40646 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC18.81■□□□□ 0.6
Sox7P40646 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC18.81■□□□□ 0.6
Sox7P40646 Gm11175-201ENSMUST00000116172 543 ntBASIC18.81■□□□□ 0.6
Sox7P40646 Gm27502-201ENSMUST00000183495 199 ntBASIC18.81■□□□□ 0.6
Sox7P40646 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Sox7P40646 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Sox7P40646 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Sox7P40646 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.8■□□□□ 0.6
Sox7P40646 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox7P40646 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Sox7P40646 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox7P40646 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox7P40646 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Sox7P40646 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox7P40646 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Sox7P40646 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.8■□□□□ 0.6
Sox7P40646 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox7P40646 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox7P40646 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox7P40646 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC18.79■□□□□ 0.6
Sox7P40646 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox7P40646 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Sox7P40646 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Sox7P40646 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Sox7P40646 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Sox7P40646 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
Sox7P40646 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Sox7P40646 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Sox7P40646 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox7P40646 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox7P40646 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
Sox7P40646 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox7P40646 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
Sox7P40646 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Sox7P40646 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Sox7P40646 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Sox7P40646 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox7P40646 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Sox7P40646 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC18.75■□□□□ 0.59
Sox7P40646 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox7P40646 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC18.75■□□□□ 0.59
Sox7P40646 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Sox7P40646 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Sox7P40646 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox7P40646 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox7P40646 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Sox7P40646 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox7P40646 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sox7P40646 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sox7P40646 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox7P40646 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sox7P40646 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms