Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
LdlrP35951 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LdlrP35951 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
LdlrP35951 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
LdlrP35951 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
LdlrP35951 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC21.13■□□□□ 0.97
LdlrP35951 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC21.13■□□□□ 0.97
LdlrP35951 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LdlrP35951 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
LdlrP35951 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LdlrP35951 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC21.12■□□□□ 0.97
LdlrP35951 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LdlrP35951 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.12■□□□□ 0.97
LdlrP35951 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LdlrP35951 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LdlrP35951 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
LdlrP35951 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LdlrP35951 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LdlrP35951 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LdlrP35951 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LdlrP35951 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LdlrP35951 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LdlrP35951 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
LdlrP35951 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.1■□□□□ 0.97
LdlrP35951 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
LdlrP35951 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
LdlrP35951 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC21.1■□□□□ 0.97
LdlrP35951 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
LdlrP35951 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
LdlrP35951 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LdlrP35951 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.1■□□□□ 0.97
LdlrP35951 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.09■□□□□ 0.97
LdlrP35951 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LdlrP35951 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
LdlrP35951 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.09■□□□□ 0.97
LdlrP35951 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LdlrP35951 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LdlrP35951 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
LdlrP35951 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.09■□□□□ 0.97
LdlrP35951 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
LdlrP35951 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
LdlrP35951 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
LdlrP35951 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
LdlrP35951 Gm5921-201ENSMUST00000075898 882 ntBASIC21.08■□□□□ 0.97
LdlrP35951 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
LdlrP35951 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
LdlrP35951 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
LdlrP35951 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Gm10420-201ENSMUST00000121713 882 ntBASIC21.07■□□□□ 0.96
LdlrP35951 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC21.07■□□□□ 0.96
LdlrP35951 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.07■□□□□ 0.96
LdlrP35951 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
LdlrP35951 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
LdlrP35951 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC21.06■□□□□ 0.96
LdlrP35951 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
LdlrP35951 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC21.05■□□□□ 0.96
LdlrP35951 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.05■□□□□ 0.96
LdlrP35951 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
LdlrP35951 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.05■□□□□ 0.96
LdlrP35951 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
LdlrP35951 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
LdlrP35951 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC21.03■□□□□ 0.96
LdlrP35951 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
LdlrP35951 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms