Protein–RNA interactions for Protein: P35278

Rab5c, Ras-related protein Rab-5C, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab5cP35278 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.37■□□□□ 0.37
Rab5cP35278 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Rab5cP35278 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC17.36■□□□□ 0.37
Rab5cP35278 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab5cP35278 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab5cP35278 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Rab5cP35278 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Rab5cP35278 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC17.36■□□□□ 0.37
Rab5cP35278 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC17.36■□□□□ 0.37
Rab5cP35278 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab5cP35278 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Rab5cP35278 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Rab5cP35278 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rab5cP35278 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Rab5cP35278 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Rab5cP35278 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Rab5cP35278 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Rab5cP35278 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab5cP35278 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Rab5cP35278 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Rab5cP35278 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab5cP35278 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab5cP35278 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab5cP35278 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Rab5cP35278 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Rab5cP35278 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
Rab5cP35278 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Rab5cP35278 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.33■□□□□ 0.36
Rab5cP35278 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Rab5cP35278 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Rab5cP35278 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Rab5cP35278 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC17.31■□□□□ 0.36
Rab5cP35278 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Rab5cP35278 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rab5cP35278 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab5cP35278 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Rab5cP35278 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rab5cP35278 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab5cP35278 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
Rab5cP35278 Gm24804-201ENSMUST00000174982 85 ntBASIC17.3■□□□□ 0.36
Rab5cP35278 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab5cP35278 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Rab5cP35278 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Rab5cP35278 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Rab5cP35278 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.29■□□□□ 0.36
Rab5cP35278 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Rab5cP35278 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Rab5cP35278 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab5cP35278 AC164433.2-201ENSMUST00000226346 1701 ntBASIC17.28■□□□□ 0.36
Rab5cP35278 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Rab5cP35278 Gm8109-201ENSMUST00000194076 746 ntBASIC17.28■□□□□ 0.36
Rab5cP35278 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC17.28■□□□□ 0.36
Rab5cP35278 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Rab5cP35278 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Rab5cP35278 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab5cP35278 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab5cP35278 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab5cP35278 Gm37136-201ENSMUST00000194368 194 ntBASIC17.27■□□□□ 0.36
Rab5cP35278 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab5cP35278 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Rab5cP35278 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab5cP35278 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Rab5cP35278 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.26■□□□□ 0.35
Rab5cP35278 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC17.26■□□□□ 0.35
Rab5cP35278 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.26■□□□□ 0.35
Rab5cP35278 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Rab5cP35278 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Rab5cP35278 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms