Protein–RNA interactions for Protein: P32972

Tnfsf8, Tumor necrosis factor ligand superfamily member 8, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf8P32972 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Tnfsf8P32972 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Tnfsf8P32972 Scarna2-201ENSMUST00000157560 414 ntBASIC17.52■□□□□ 0.4
Tnfsf8P32972 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC17.52■□□□□ 0.4
Tnfsf8P32972 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf8P32972 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf8P32972 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Tnfsf8P32972 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Tnfsf8P32972 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
Tnfsf8P32972 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Gm16437-201ENSMUST00000025669 507 ntBASIC17.51■□□□□ 0.39
Tnfsf8P32972 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.51■□□□□ 0.39
Tnfsf8P32972 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.51■□□□□ 0.39
Tnfsf8P32972 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Tnfsf8P32972 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Tnfsf8P32972 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 AC117769.4-201ENSMUST00000225679 685 ntBASIC17.48■□□□□ 0.39
Tnfsf8P32972 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Gm9806-201ENSMUST00000051080 552 ntBASIC17.48■□□□□ 0.39
Tnfsf8P32972 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Tnfsf8P32972 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Tnfsf8P32972 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Tnfsf8P32972 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Tnfsf8P32972 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.45■□□□□ 0.38
Tnfsf8P32972 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Tnfsf8P32972 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.44■□□□□ 0.38
Tnfsf8P32972 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf8P32972 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.43■□□□□ 0.38
Tnfsf8P32972 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf8P32972 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf8P32972 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf8P32972 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Tnfsf8P32972 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms