Protein–RNA interactions for Protein: P27048

Snrpb, Small nuclear ribonucleoprotein-associated protein B, mousemouse

Known RBP Predictions only

Length 231 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SnrpbP27048 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC18.63■□□□□ 0.57
SnrpbP27048 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SnrpbP27048 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SnrpbP27048 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.62■□□□□ 0.57
SnrpbP27048 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC18.62■□□□□ 0.57
SnrpbP27048 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SnrpbP27048 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SnrpbP27048 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SnrpbP27048 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SnrpbP27048 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SnrpbP27048 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
SnrpbP27048 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC18.61■□□□□ 0.57
SnrpbP27048 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SnrpbP27048 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SnrpbP27048 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC18.6■□□□□ 0.57
SnrpbP27048 Terc-201ENSMUST00000082862 423 ntBASIC18.6■□□□□ 0.57
SnrpbP27048 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
SnrpbP27048 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SnrpbP27048 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
SnrpbP27048 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SnrpbP27048 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SnrpbP27048 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.58■□□□□ 0.57
SnrpbP27048 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
SnrpbP27048 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SnrpbP27048 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
SnrpbP27048 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SnrpbP27048 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SnrpbP27048 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.58■□□□□ 0.56
SnrpbP27048 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SnrpbP27048 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.57■□□□□ 0.56
SnrpbP27048 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
SnrpbP27048 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SnrpbP27048 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.57■□□□□ 0.56
SnrpbP27048 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SnrpbP27048 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SnrpbP27048 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SnrpbP27048 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
SnrpbP27048 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
SnrpbP27048 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SnrpbP27048 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SnrpbP27048 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
SnrpbP27048 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SnrpbP27048 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SnrpbP27048 Gm6821-201ENSMUST00000107540 542 ntBASIC18.55■□□□□ 0.56
SnrpbP27048 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC18.55■□□□□ 0.56
SnrpbP27048 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SnrpbP27048 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SnrpbP27048 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SnrpbP27048 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SnrpbP27048 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SnrpbP27048 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SnrpbP27048 Gm12818-201ENSMUST00000117562 1349 ntBASIC18.54■□□□□ 0.56
SnrpbP27048 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SnrpbP27048 Mir3960-201ENSMUST00000198213 73 ntBASIC18.54■□□□□ 0.56
SnrpbP27048 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SnrpbP27048 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SnrpbP27048 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC18.54■□□□□ 0.56
SnrpbP27048 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.54■□□□□ 0.56
SnrpbP27048 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SnrpbP27048 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SnrpbP27048 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.53■□□□□ 0.56
SnrpbP27048 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC18.53■□□□□ 0.56
SnrpbP27048 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC18.53■□□□□ 0.56
SnrpbP27048 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SnrpbP27048 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SnrpbP27048 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SnrpbP27048 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SnrpbP27048 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SnrpbP27048 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SnrpbP27048 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SnrpbP27048 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SnrpbP27048 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SnrpbP27048 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SnrpbP27048 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SnrpbP27048 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms