Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Gm5812-201ENSMUST00000061073 957 ntBASIC21.01■□□□□ 0.95
PdgfaP20033 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
PdgfaP20033 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
PdgfaP20033 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfaP20033 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfaP20033 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfaP20033 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
PdgfaP20033 Fancf-201ENSMUST00000169357 1691 ntAPPRIS P1 BASIC21■□□□□ 0.95
PdgfaP20033 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
PdgfaP20033 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21■□□□□ 0.95
PdgfaP20033 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21■□□□□ 0.95
PdgfaP20033 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
PdgfaP20033 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.99■□□□□ 0.95
PdgfaP20033 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC20.99■□□□□ 0.95
PdgfaP20033 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PdgfaP20033 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PdgfaP20033 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfaP20033 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PdgfaP20033 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PdgfaP20033 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfaP20033 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PdgfaP20033 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.97■□□□□ 0.95
PdgfaP20033 Gm22567-201ENSMUST00000175542 342 ntBASIC20.97■□□□□ 0.95
PdgfaP20033 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PdgfaP20033 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PdgfaP20033 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
PdgfaP20033 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Gm5921-201ENSMUST00000075898 882 ntBASIC20.96■□□□□ 0.95
PdgfaP20033 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.96■□□□□ 0.95
PdgfaP20033 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.96■□□□□ 0.95
PdgfaP20033 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.96■□□□□ 0.95
PdgfaP20033 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PdgfaP20033 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfaP20033 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC20.95■□□□□ 0.94
PdgfaP20033 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfaP20033 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfaP20033 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
PdgfaP20033 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PdgfaP20033 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PdgfaP20033 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.95■□□□□ 0.94
PdgfaP20033 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfaP20033 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfaP20033 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
PdgfaP20033 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.94■□□□□ 0.94
PdgfaP20033 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PdgfaP20033 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.94■□□□□ 0.94
PdgfaP20033 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.94■□□□□ 0.94
PdgfaP20033 Iqck-206ENSMUST00000208658 2891 ntBASIC20.94■□□□□ 0.94
PdgfaP20033 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
PdgfaP20033 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PdgfaP20033 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Gm4419-202ENSMUST00000226239 1431 ntBASIC20.93■□□□□ 0.94
PdgfaP20033 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
PdgfaP20033 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfaP20033 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfaP20033 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.92■□□□□ 0.94
PdgfaP20033 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.92■□□□□ 0.94
PdgfaP20033 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
PdgfaP20033 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfaP20033 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfaP20033 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfaP20033 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PdgfaP20033 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfaP20033 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfaP20033 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.9■□□□□ 0.94
PdgfaP20033 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC20.9■□□□□ 0.94
PdgfaP20033 Terc-201ENSMUST00000082862 423 ntBASIC20.9■□□□□ 0.94
PdgfaP20033 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PdgfaP20033 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfaP20033 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PdgfaP20033 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PdgfaP20033 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.89■□□□□ 0.93
PdgfaP20033 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PdgfaP20033 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PdgfaP20033 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PdgfaP20033 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.88■□□□□ 0.93
PdgfaP20033 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms