Protein–RNA interactions for Protein: P14576

Srp54, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54P14576 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Srp54P14576 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.88■□□□□ 0.93
Srp54P14576 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.88■□□□□ 0.93
Srp54P14576 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.88■□□□□ 0.93
Srp54P14576 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.88■□□□□ 0.93
Srp54P14576 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Srp54P14576 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Srp54P14576 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.88■□□□□ 0.93
Srp54P14576 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Srp54P14576 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Srp54P14576 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.87■□□□□ 0.93
Srp54P14576 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.87■□□□□ 0.93
Srp54P14576 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Srp54P14576 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp54P14576 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp54P14576 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp54P14576 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.86■□□□□ 0.93
Srp54P14576 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp54P14576 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.86■□□□□ 0.93
Srp54P14576 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.86■□□□□ 0.93
Srp54P14576 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.86■□□□□ 0.93
Srp54P14576 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.86■□□□□ 0.93
Srp54P14576 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Srp54P14576 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.86■□□□□ 0.93
Srp54P14576 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Srp54P14576 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.85■□□□□ 0.93
Srp54P14576 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Srp54P14576 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Srp54P14576 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Srp54P14576 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Srp54P14576 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.85■□□□□ 0.93
Srp54P14576 Bend7-202ENSMUST00000115022 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC20.84■□□□□ 0.93
Srp54P14576 Gm40881-201ENSMUST00000223397 166 ntBASIC20.84■□□□□ 0.93
Srp54P14576 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Srp54P14576 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
Srp54P14576 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Srp54P14576 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srp54P14576 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Srp54P14576 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Srp54P14576 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Srp54P14576 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.82■□□□□ 0.92
Srp54P14576 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.82■□□□□ 0.92
Srp54P14576 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Srp54P14576 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srp54P14576 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srp54P14576 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srp54P14576 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Srp54P14576 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Srp54P14576 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.81■□□□□ 0.92
Srp54P14576 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Srp54P14576 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp54P14576 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.8■□□□□ 0.92
Srp54P14576 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC20.8■□□□□ 0.92
Srp54P14576 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.8■□□□□ 0.92
Srp54P14576 Gm10399-202ENSMUST00000202768 748 ntBASIC20.8■□□□□ 0.92
Srp54P14576 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp54P14576 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Srp54P14576 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.8■□□□□ 0.92
Srp54P14576 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp54P14576 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp54P14576 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp54P14576 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp54P14576 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Srp54P14576 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Srp54P14576 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.78■□□□□ 0.92
Srp54P14576 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Srp54P14576 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC20.77■□□□□ 0.92
Srp54P14576 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Srp54P14576 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.91
Srp54P14576 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Srp54P14576 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
Srp54P14576 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Srp54P14576 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Srp54P14576 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms