Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim1P0C8K7 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC14.71□□□□□ -0.05
Smim1P0C8K7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Smim1P0C8K7 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Smim1P0C8K7 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC14.7□□□□□ -0.06
Smim1P0C8K7 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Smim1P0C8K7 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Smim1P0C8K7 AC157572.2-201ENSMUST00000226970 908 ntBASIC14.69□□□□□ -0.06
Smim1P0C8K7 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC14.69□□□□□ -0.06
Smim1P0C8K7 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.68□□□□□ -0.06
Smim1P0C8K7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim1P0C8K7 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim1P0C8K7 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.66□□□□□ -0.06
Smim1P0C8K7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.66□□□□□ -0.06
Smim1P0C8K7 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Smim1P0C8K7 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Gm43863-201ENSMUST00000203822 1192 ntBASIC14.65□□□□□ -0.06
Smim1P0C8K7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Gm43545-201ENSMUST00000196765 2779 ntBASIC14.65□□□□□ -0.06
Smim1P0C8K7 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.65□□□□□ -0.06
Smim1P0C8K7 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC14.64□□□□□ -0.07
Smim1P0C8K7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim1P0C8K7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim1P0C8K7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smim1P0C8K7 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC14.63□□□□□ -0.07
Smim1P0C8K7 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC14.63□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms