Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
ApoeP08226 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ApoeP08226 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
ApoeP08226 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ApoeP08226 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC20.12■□□□□ 0.81
ApoeP08226 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
ApoeP08226 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
ApoeP08226 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ApoeP08226 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
ApoeP08226 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC20.11■□□□□ 0.81
ApoeP08226 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ApoeP08226 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
ApoeP08226 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ApoeP08226 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
ApoeP08226 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
ApoeP08226 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
ApoeP08226 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ApoeP08226 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
ApoeP08226 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ApoeP08226 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
ApoeP08226 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.08■□□□□ 0.81
ApoeP08226 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
ApoeP08226 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.08■□□□□ 0.81
ApoeP08226 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
ApoeP08226 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
ApoeP08226 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
ApoeP08226 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
ApoeP08226 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ApoeP08226 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ApoeP08226 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
ApoeP08226 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ApoeP08226 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.06■□□□□ 0.8
ApoeP08226 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.05■□□□□ 0.8
ApoeP08226 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC20.05■□□□□ 0.8
ApoeP08226 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.05■□□□□ 0.8
ApoeP08226 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ApoeP08226 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
ApoeP08226 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
ApoeP08226 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ApoeP08226 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ApoeP08226 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.04■□□□□ 0.8
ApoeP08226 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
ApoeP08226 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ApoeP08226 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ApoeP08226 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC20.03■□□□□ 0.8
ApoeP08226 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.03■□□□□ 0.8
ApoeP08226 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.03■□□□□ 0.8
ApoeP08226 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
ApoeP08226 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
ApoeP08226 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
ApoeP08226 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
ApoeP08226 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
ApoeP08226 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
ApoeP08226 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ApoeP08226 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
ApoeP08226 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
ApoeP08226 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ApoeP08226 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.01■□□□□ 0.79
ApoeP08226 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
ApoeP08226 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
ApoeP08226 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20■□□□□ 0.79
ApoeP08226 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ApoeP08226 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20■□□□□ 0.79
ApoeP08226 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20■□□□□ 0.79
ApoeP08226 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
ApoeP08226 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC20■□□□□ 0.79
ApoeP08226 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20■□□□□ 0.79
ApoeP08226 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ApoeP08226 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
ApoeP08226 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms