Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.46■□□□□ 0.06
TcraP01849 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
TcraP01849 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC15.45■□□□□ 0.06
TcraP01849 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC15.45■□□□□ 0.06
TcraP01849 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
TcraP01849 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
TcraP01849 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.45■□□□□ 0.06
TcraP01849 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
TcraP01849 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC15.44■□□□□ 0.06
TcraP01849 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC15.44■□□□□ 0.06
TcraP01849 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
TcraP01849 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC15.43■□□□□ 0.06
TcraP01849 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
TcraP01849 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC15.43■□□□□ 0.06
TcraP01849 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
TcraP01849 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TcraP01849 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC15.42■□□□□ 0.06
TcraP01849 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
TcraP01849 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
TcraP01849 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
TcraP01849 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC15.41■□□□□ 0.06
TcraP01849 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
TcraP01849 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TcraP01849 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC15.4■□□□□ 0.06
TcraP01849 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Gm28731-201ENSMUST00000185564 1569 ntBASIC15.4■□□□□ 0.06
TcraP01849 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TcraP01849 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
TcraP01849 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
TcraP01849 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
TcraP01849 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC15.38■□□□□ 0.05
TcraP01849 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TcraP01849 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
TcraP01849 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
TcraP01849 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
TcraP01849 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TcraP01849 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TcraP01849 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TcraP01849 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TcraP01849 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TcraP01849 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
TcraP01849 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC15.34■□□□□ 0.05
TcraP01849 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TcraP01849 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC15.34■□□□□ 0.05
TcraP01849 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TcraP01849 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TcraP01849 AC164433.2-201ENSMUST00000226346 1701 ntBASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms