Protein–RNA interactions for Protein: P01804

Ig heavy chain V-III region HPC76 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01804 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
P01804 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
P01804 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01804 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
P01804 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
P01804 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.54
P01804 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
P01804 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.39■□□□□ 0.53
P01804 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC18.39■□□□□ 0.53
P01804 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01804 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.39■□□□□ 0.53
P01804 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01804 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
P01804 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01804 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01804 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
P01804 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
P01804 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01804 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
P01804 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
P01804 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
P01804 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
P01804 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.37■□□□□ 0.53
P01804 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.37■□□□□ 0.53
P01804 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
P01804 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
P01804 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01804 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.36■□□□□ 0.53
P01804 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC18.36■□□□□ 0.53
P01804 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
P01804 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.35■□□□□ 0.53
P01804 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
P01804 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
P01804 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.35■□□□□ 0.53
P01804 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.35■□□□□ 0.53
P01804 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
P01804 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.34■□□□□ 0.53
P01804 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01804 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
P01804 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
P01804 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
P01804 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
P01804 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
P01804 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01804 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01804 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
P01804 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.33■□□□□ 0.53
P01804 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01804 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01804 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
P01804 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
P01804 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01804 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
P01804 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
P01804 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
P01804 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
P01804 Gm5812-201ENSMUST00000061073 957 ntBASIC18.32■□□□□ 0.52
P01804 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
P01804 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P01804 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
P01804 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.31■□□□□ 0.52
P01804 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
P01804 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.31■□□□□ 0.52
P01804 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
P01804 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 AC115037.1-201ENSMUST00000223391 2173 ntBASIC18.3■□□□□ 0.52
P01804 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.3■□□□□ 0.52
P01804 Gm10232-201ENSMUST00000089221 720 ntBASIC18.3■□□□□ 0.52
P01804 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.3■□□□□ 0.52
P01804 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
P01804 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms