Protein–RNA interactions for Protein: P01758

Igh-VJ558, Ig heavy chain V region 108A, mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igh-VJ558P01758 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC18.57■□□□□ 0.56
Igh-VJ558P01758 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igh-VJ558P01758 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igh-VJ558P01758 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC18.55■□□□□ 0.56
Igh-VJ558P01758 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Igh-VJ558P01758 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igh-VJ558P01758 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Igh-VJ558P01758 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Igh-VJ558P01758 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.51■□□□□ 0.55
Igh-VJ558P01758 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igh-VJ558P01758 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igh-VJ558P01758 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Igh-VJ558P01758 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
Igh-VJ558P01758 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igh-VJ558P01758 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igh-VJ558P01758 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igh-VJ558P01758 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
Igh-VJ558P01758 Cap2-205ENSMUST00000225824 1634 ntBASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Igh-VJ558P01758 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Gm5067-201ENSMUST00000170449 1009 ntBASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Igh-VJ558P01758 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igh-VJ558P01758 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igh-VJ558P01758 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igh-VJ558P01758 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Igh-VJ558P01758 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igh-VJ558P01758 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Igh-VJ558P01758 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Igh-VJ558P01758 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Igh-VJ558P01758 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.43■□□□□ 0.54
Igh-VJ558P01758 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Igh-VJ558P01758 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Igh-VJ558P01758 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igh-VJ558P01758 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Igh-VJ558P01758 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Gm12504-201ENSMUST00000120860 2231 ntBASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Igh-VJ558P01758 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igh-VJ558P01758 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 12.8 ms