Protein–RNA interactions for Protein: P01660

Ig kappa chain V-III region PC 3741/TEPC 111, mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01660 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
P01660 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
P01660 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01660 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
P01660 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
P01660 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
P01660 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
P01660 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
P01660 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
P01660 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01660 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01660 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
P01660 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.74■□□□□ 0.43
P01660 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.74■□□□□ 0.43
P01660 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01660 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
P01660 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.73■□□□□ 0.43
P01660 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01660 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC17.73■□□□□ 0.43
P01660 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
P01660 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.73■□□□□ 0.43
P01660 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
P01660 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
P01660 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01660 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01660 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC17.71■□□□□ 0.43
P01660 Gm43006-201ENSMUST00000197702 1602 ntBASIC17.71■□□□□ 0.43
P01660 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
P01660 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC17.7■□□□□ 0.42
P01660 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P01660 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 Gm7332-201ENSMUST00000118351 454 ntBASIC17.7■□□□□ 0.42
P01660 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.7■□□□□ 0.42
P01660 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.7■□□□□ 0.42
P01660 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
P01660 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
P01660 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01660 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01660 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
P01660 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC17.68■□□□□ 0.42
P01660 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC17.68■□□□□ 0.42
P01660 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
P01660 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
P01660 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
P01660 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
P01660 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
P01660 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
P01660 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01660 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01660 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
P01660 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.66■□□□□ 0.42
P01660 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
P01660 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.66■□□□□ 0.42
P01660 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.65■□□□□ 0.42
P01660 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
P01660 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
P01660 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC17.64■□□□□ 0.42
P01660 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
P01660 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
P01660 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms