Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Iqck-206ENSMUST00000208658 2891 ntBASIC20.32■□□□□ 0.84
Hcn3O88705 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.32■□□□□ 0.84
Hcn3O88705 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn3O88705 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Hcn3O88705 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.32■□□□□ 0.84
Hcn3O88705 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn3O88705 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Hcn3O88705 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hcn3O88705 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Hcn3O88705 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.31■□□□□ 0.84
Hcn3O88705 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.31■□□□□ 0.84
Hcn3O88705 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Hcn3O88705 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Hcn3O88705 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.3■□□□□ 0.84
Hcn3O88705 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Hcn3O88705 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Hcn3O88705 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.3■□□□□ 0.84
Hcn3O88705 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.29■□□□□ 0.84
Hcn3O88705 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn3O88705 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hcn3O88705 Gm6311-201ENSMUST00000073790 878 ntBASIC20.29■□□□□ 0.84
Hcn3O88705 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn3O88705 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Hcn3O88705 Gm7199-201ENSMUST00000118327 1485 ntBASIC20.29■□□□□ 0.84
Hcn3O88705 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Hcn3O88705 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Hcn3O88705 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hcn3O88705 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn3O88705 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn3O88705 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Hcn3O88705 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn3O88705 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.28■□□□□ 0.84
Hcn3O88705 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Hcn3O88705 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn3O88705 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Hcn3O88705 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Gm45364-201ENSMUST00000210883 159 ntBASIC20.27■□□□□ 0.84
Hcn3O88705 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Hcn3O88705 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hcn3O88705 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hcn3O88705 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Hcn3O88705 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Hcn3O88705 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.26■□□□□ 0.83
Hcn3O88705 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Hcn3O88705 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
Hcn3O88705 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.25■□□□□ 0.83
Hcn3O88705 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.25■□□□□ 0.83
Hcn3O88705 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Hcn3O88705 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.25■□□□□ 0.83
Hcn3O88705 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.25■□□□□ 0.83
Hcn3O88705 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcn3O88705 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Hcn3O88705 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Hcn3O88705 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
Hcn3O88705 Gm9812-201ENSMUST00000061934 968 ntBASIC20.24■□□□□ 0.83
Hcn3O88705 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.24■□□□□ 0.83
Hcn3O88705 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Hcn3O88705 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Hcn3O88705 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Hcn3O88705 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.23■□□□□ 0.83
Hcn3O88705 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcn3O88705 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcn3O88705 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Hcn3O88705 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.22■□□□□ 0.83
Hcn3O88705 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Hcn3O88705 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Hcn3O88705 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.21■□□□□ 0.83
Hcn3O88705 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.21■□□□□ 0.83
Hcn3O88705 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Hcn3O88705 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms