Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cops6O88545 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Cops6O88545 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC26.35■■□□□ 1.81
Cops6O88545 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.34■■□□□ 1.81
Cops6O88545 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Cops6O88545 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC26.33■■□□□ 1.81
Cops6O88545 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cops6O88545 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Cops6O88545 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Cops6O88545 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
Cops6O88545 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Cops6O88545 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC26.32■■□□□ 1.8
Cops6O88545 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cops6O88545 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cops6O88545 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cops6O88545 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC26.31■■□□□ 1.8
Cops6O88545 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cops6O88545 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Cops6O88545 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
Cops6O88545 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC26.3■■□□□ 1.8
Cops6O88545 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cops6O88545 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Cops6O88545 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC26.29■■□□□ 1.8
Cops6O88545 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cops6O88545 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Cops6O88545 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Cops6O88545 Gm12922-201ENSMUST00000120626 809 ntBASIC26.28■■□□□ 1.8
Cops6O88545 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cops6O88545 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Cops6O88545 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC26.27■■□□□ 1.8
Cops6O88545 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC26.27■■□□□ 1.8
Cops6O88545 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.27■■□□□ 1.8
Cops6O88545 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
Cops6O88545 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cops6O88545 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Cops6O88545 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC26.26■■□□□ 1.79
Cops6O88545 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Cops6O88545 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.26■■□□□ 1.79
Cops6O88545 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26.26■■□□□ 1.79
Cops6O88545 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cops6O88545 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Cops6O88545 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.25■■□□□ 1.79
Cops6O88545 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC26.25■■□□□ 1.79
Cops6O88545 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC26.25■■□□□ 1.79
Cops6O88545 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.25■■□□□ 1.79
Cops6O88545 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Cops6O88545 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Cops6O88545 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Cops6O88545 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC26.24■■□□□ 1.79
Cops6O88545 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
Cops6O88545 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cops6O88545 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cops6O88545 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC26.23■■□□□ 1.79
Cops6O88545 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cops6O88545 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.23■■□□□ 1.79
Cops6O88545 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Cops6O88545 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Cops6O88545 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.23■■□□□ 1.79
Cops6O88545 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cops6O88545 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cops6O88545 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cops6O88545 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC26.22■■□□□ 1.79
Cops6O88545 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC26.22■■□□□ 1.79
Cops6O88545 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Cops6O88545 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Cops6O88545 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Cops6O88545 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cops6O88545 AC158990.1-201ENSMUST00000221450 2016 ntBASIC26.21■■□□□ 1.79
Cops6O88545 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cops6O88545 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC26.21■■□□□ 1.79
Cops6O88545 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC26.21■■□□□ 1.79
Cops6O88545 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Cops6O88545 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Cops6O88545 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.2■■□□□ 1.78
Cops6O88545 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cops6O88545 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cops6O88545 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cops6O88545 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cops6O88545 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC26.19■■□□□ 1.78
Cops6O88545 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Cops6O88545 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cops6O88545 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cops6O88545 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cops6O88545 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Cops6O88545 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Cops6O88545 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
Cops6O88545 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms