Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Serp2-204ENSMUST00000228055 705 ntBASIC20.44■□□□□ 0.86
Tgfbr3O88393 Golgb1-201ENSMUST00000023534 498 ntBASIC20.44■□□□□ 0.86
Tgfbr3O88393 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Tgfbr3O88393 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tgfbr3O88393 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.43■□□□□ 0.86
Tgfbr3O88393 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.43■□□□□ 0.86
Tgfbr3O88393 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tgfbr3O88393 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tgfbr3O88393 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tgfbr3O88393 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.42■□□□□ 0.86
Tgfbr3O88393 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.42■□□□□ 0.86
Tgfbr3O88393 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.42■□□□□ 0.86
Tgfbr3O88393 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tgfbr3O88393 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tgfbr3O88393 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Tgfbr3O88393 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.42■□□□□ 0.86
Tgfbr3O88393 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Tgfbr3O88393 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.41■□□□□ 0.86
Tgfbr3O88393 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Tgfbr3O88393 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tgfbr3O88393 Gm45417-201ENSMUST00000209533 758 ntBASIC20.4■□□□□ 0.86
Tgfbr3O88393 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Tgfbr3O88393 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Tgfbr3O88393 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Tgfbr3O88393 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Tgfbr3O88393 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr3O88393 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
Tgfbr3O88393 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr3O88393 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr3O88393 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.85
Tgfbr3O88393 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr3O88393 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.39■□□□□ 0.85
Tgfbr3O88393 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Tgfbr3O88393 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Tgfbr3O88393 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC20.38■□□□□ 0.85
Tgfbr3O88393 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC20.38■□□□□ 0.85
Tgfbr3O88393 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Tgfbr3O88393 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tgfbr3O88393 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
Tgfbr3O88393 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Tgfbr3O88393 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Tgfbr3O88393 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.36■□□□□ 0.85
Tgfbr3O88393 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tgfbr3O88393 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Tgfbr3O88393 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.36■□□□□ 0.85
Tgfbr3O88393 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Tgfbr3O88393 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tgfbr3O88393 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Tgfbr3O88393 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC20.34■□□□□ 0.85
Tgfbr3O88393 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Tgfbr3O88393 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Tgfbr3O88393 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Tgfbr3O88393 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.33■□□□□ 0.85
Tgfbr3O88393 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Tgfbr3O88393 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Tgfbr3O88393 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Tgfbr3O88393 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Tgfbr3O88393 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.33■□□□□ 0.84
Tgfbr3O88393 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr3O88393 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr3O88393 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr3O88393 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr3O88393 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Tgfbr3O88393 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3O88393 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3O88393 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.31■□□□□ 0.84
Tgfbr3O88393 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Tgfbr3O88393 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Tgfbr3O88393 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Tgfbr3O88393 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3O88393 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3O88393 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Tgfbr3O88393 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Tgfbr3O88393 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.28■□□□□ 0.84
Tgfbr3O88393 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Tgfbr3O88393 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms