Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.79■□□□□ 0.92
Cdh16O88338 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Cdh16O88338 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Cdh16O88338 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh16O88338 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.78■□□□□ 0.92
Cdh16O88338 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Cdh16O88338 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.78■□□□□ 0.92
Cdh16O88338 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Cdh16O88338 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh16O88338 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh16O88338 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh16O88338 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Cdh16O88338 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
Cdh16O88338 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh16O88338 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.76■□□□□ 0.91
Cdh16O88338 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.76■□□□□ 0.91
Cdh16O88338 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh16O88338 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh16O88338 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Cdh16O88338 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh16O88338 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh16O88338 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh16O88338 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.75■□□□□ 0.91
Cdh16O88338 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Cdh16O88338 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Cdh16O88338 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh16O88338 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh16O88338 Gm11599-201ENSMUST00000118720 878 ntBASIC20.74■□□□□ 0.91
Cdh16O88338 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh16O88338 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Cdh16O88338 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh16O88338 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Cdh16O88338 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh16O88338 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh16O88338 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Cdh16O88338 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Cdh16O88338 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Cdh16O88338 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Cdh16O88338 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Cdh16O88338 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.91
Cdh16O88338 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdh16O88338 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Cdh16O88338 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdh16O88338 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Cdh16O88338 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Cdh16O88338 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh16O88338 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdh16O88338 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh16O88338 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh16O88338 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.7■□□□□ 0.9
Cdh16O88338 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cdh16O88338 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh16O88338 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh16O88338 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Cdh16O88338 Mir3960-201ENSMUST00000198213 73 ntBASIC20.69■□□□□ 0.9
Cdh16O88338 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Cdh16O88338 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh16O88338 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cdh16O88338 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh16O88338 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh16O88338 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cdh16O88338 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cdh16O88338 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh16O88338 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh16O88338 Gm9812-201ENSMUST00000061934 968 ntBASIC20.67■□□□□ 0.9
Cdh16O88338 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh16O88338 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cdh16O88338 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh16O88338 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
Cdh16O88338 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh16O88338 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh16O88338 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cdh16O88338 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Cdh16O88338 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
Cdh16O88338 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cdh16O88338 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cdh16O88338 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms