Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC28.43■■■□□ 2.14
Ubr1O70481 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Ubr1O70481 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Ubr1O70481 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC28.42■■■□□ 2.14
Ubr1O70481 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ubr1O70481 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ubr1O70481 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
Ubr1O70481 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC28.42■■■□□ 2.14
Ubr1O70481 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC28.41■■■□□ 2.14
Ubr1O70481 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC28.41■■■□□ 2.14
Ubr1O70481 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ubr1O70481 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ubr1O70481 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Ubr1O70481 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ubr1O70481 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ubr1O70481 Golgb1-201ENSMUST00000023534 498 ntBASIC28.4■■■□□ 2.14
Ubr1O70481 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ubr1O70481 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ubr1O70481 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Ubr1O70481 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC28.39■■■□□ 2.14
Ubr1O70481 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC28.39■■■□□ 2.14
Ubr1O70481 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ubr1O70481 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Ubr1O70481 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ubr1O70481 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Ubr1O70481 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC28.39■■■□□ 2.14
Ubr1O70481 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Ubr1O70481 Gm27454-201ENSMUST00000185090 204 ntBASIC28.39■■■□□ 2.13
Ubr1O70481 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ubr1O70481 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Ubr1O70481 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Ubr1O70481 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC28.38■■■□□ 2.13
Ubr1O70481 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ubr1O70481 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ubr1O70481 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ubr1O70481 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Ubr1O70481 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ubr1O70481 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ubr1O70481 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
Ubr1O70481 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Ubr1O70481 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC28.36■■■□□ 2.13
Ubr1O70481 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC28.36■■■□□ 2.13
Ubr1O70481 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC28.36■■■□□ 2.13
Ubr1O70481 AC140930.3-201ENSMUST00000222935 274 ntBASIC28.36■■■□□ 2.13
Ubr1O70481 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ubr1O70481 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ubr1O70481 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Ubr1O70481 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC28.35■■■□□ 2.13
Ubr1O70481 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ubr1O70481 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC28.35■■■□□ 2.13
Ubr1O70481 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Ubr1O70481 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC28.34■■■□□ 2.13
Ubr1O70481 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Ubr1O70481 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC28.34■■■□□ 2.13
Ubr1O70481 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC28.34■■■□□ 2.13
Ubr1O70481 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
Ubr1O70481 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC28.33■■■□□ 2.13
Ubr1O70481 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ubr1O70481 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ubr1O70481 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ubr1O70481 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Ubr1O70481 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ubr1O70481 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC28.32■■■□□ 2.12
Ubr1O70481 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Ubr1O70481 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
Ubr1O70481 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ubr1O70481 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ubr1O70481 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
Ubr1O70481 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Ubr1O70481 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Ubr1O70481 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Ubr1O70481 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ubr1O70481 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ubr1O70481 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC28.3■■■□□ 2.12
Ubr1O70481 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC28.29■■■□□ 2.12
Ubr1O70481 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC28.29■■■□□ 2.12
Ubr1O70481 Gm45417-201ENSMUST00000209533 758 ntBASIC28.29■■■□□ 2.12
Ubr1O70481 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ubr1O70481 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC28.29■■■□□ 2.12
Ubr1O70481 AC158990.1-201ENSMUST00000221450 2016 ntBASIC28.29■■■□□ 2.12
Ubr1O70481 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ubr1O70481 Appbp2os-202ENSMUST00000206972 447 ntBASIC28.29■■■□□ 2.12
Ubr1O70481 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ubr1O70481 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Ubr1O70481 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC28.28■■■□□ 2.12
Ubr1O70481 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ubr1O70481 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ubr1O70481 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC28.28■■■□□ 2.12
Ubr1O70481 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
Ubr1O70481 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
Ubr1O70481 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ubr1O70481 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ubr1O70481 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC28.27■■■□□ 2.12
Ubr1O70481 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
Ubr1O70481 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Ubr1O70481 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC28.27■■■□□ 2.12
Ubr1O70481 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC28.26■■■□□ 2.11
Ubr1O70481 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC28.26■■■□□ 2.11
Ubr1O70481 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Ubr1O70481 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms