Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cxcl13O55038 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl13O55038 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl13O55038 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC18.14■□□□□ 0.49
Cxcl13O55038 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl13O55038 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Cxcl13O55038 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl13O55038 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC18.14■□□□□ 0.49
Cxcl13O55038 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cxcl13O55038 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Cxcl13O55038 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl13O55038 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
Cxcl13O55038 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl13O55038 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl13O55038 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl13O55038 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cxcl13O55038 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cxcl13O55038 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl13O55038 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC18.11■□□□□ 0.49
Cxcl13O55038 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl13O55038 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl13O55038 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cxcl13O55038 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC18.1■□□□□ 0.49
Cxcl13O55038 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cxcl13O55038 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.09■□□□□ 0.49
Cxcl13O55038 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC18.09■□□□□ 0.49
Cxcl13O55038 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.09■□□□□ 0.49
Cxcl13O55038 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.09■□□□□ 0.49
Cxcl13O55038 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cxcl13O55038 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.49
Cxcl13O55038 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Cxcl13O55038 Gm22238-201ENSMUST00000175222 88 ntBASIC18.08■□□□□ 0.48
Cxcl13O55038 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl13O55038 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cxcl13O55038 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl13O55038 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Cxcl13O55038 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cxcl13O55038 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC18.08■□□□□ 0.48
Cxcl13O55038 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cxcl13O55038 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.08■□□□□ 0.48
Cxcl13O55038 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.07■□□□□ 0.48
Cxcl13O55038 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cxcl13O55038 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Cxcl13O55038 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl13O55038 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl13O55038 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl13O55038 Gm10620-201ENSMUST00000098379 1332 ntBASIC18.06■□□□□ 0.48
Cxcl13O55038 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Cxcl13O55038 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cxcl13O55038 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC18.06■□□□□ 0.48
Cxcl13O55038 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.05■□□□□ 0.48
Cxcl13O55038 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.05■□□□□ 0.48
Cxcl13O55038 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Cxcl13O55038 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Cxcl13O55038 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl13O55038 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC18.04■□□□□ 0.48
Cxcl13O55038 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.04■□□□□ 0.48
Cxcl13O55038 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl13O55038 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Cxcl13O55038 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl13O55038 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Cxcl13O55038 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl13O55038 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl13O55038 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Cxcl13O55038 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Cxcl13O55038 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl13O55038 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Cxcl13O55038 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl13O55038 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl13O55038 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Cxcl13O55038 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms