Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Matn3O35701 Kdm3b-204ENSMUST00000224715 2032 ntBASIC19.3■□□□□ 0.68
Matn3O35701 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Matn3O35701 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.3■□□□□ 0.68
Matn3O35701 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Matn3O35701 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Matn3O35701 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Matn3O35701 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Matn3O35701 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Matn3O35701 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Matn3O35701 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Matn3O35701 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Matn3O35701 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Matn3O35701 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Matn3O35701 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Matn3O35701 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Matn3O35701 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC19.27■□□□□ 0.68
Matn3O35701 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Matn3O35701 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC19.27■□□□□ 0.67
Matn3O35701 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Matn3O35701 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Matn3O35701 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Matn3O35701 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Matn3O35701 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Matn3O35701 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Matn3O35701 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Matn3O35701 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Matn3O35701 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Matn3O35701 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC19.24■□□□□ 0.67
Matn3O35701 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Matn3O35701 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Matn3O35701 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Matn3O35701 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Matn3O35701 Golph3-202ENSMUST00000226517 2359 ntBASIC19.24■□□□□ 0.67
Matn3O35701 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Matn3O35701 Gm7199-201ENSMUST00000118327 1485 ntBASIC19.23■□□□□ 0.67
Matn3O35701 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.23■□□□□ 0.67
Matn3O35701 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC19.23■□□□□ 0.67
Matn3O35701 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
Matn3O35701 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Matn3O35701 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Matn3O35701 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Matn3O35701 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Matn3O35701 Gm7432-201ENSMUST00000210343 879 ntBASIC19.22■□□□□ 0.67
Matn3O35701 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Matn3O35701 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Matn3O35701 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.21■□□□□ 0.67
Matn3O35701 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Matn3O35701 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Matn3O35701 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.66
Matn3O35701 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Matn3O35701 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Matn3O35701 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Matn3O35701 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Matn3O35701 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC19.19■□□□□ 0.66
Matn3O35701 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
Matn3O35701 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Matn3O35701 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Matn3O35701 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Matn3O35701 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Matn3O35701 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms