Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nr1i3O35627 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nr1i3O35627 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.97■■□□□ 1.27
Nr1i3O35627 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nr1i3O35627 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nr1i3O35627 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nr1i3O35627 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Gm14523-201ENSMUST00000117260 558 ntBASIC22.96■■□□□ 1.27
Nr1i3O35627 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nr1i3O35627 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC22.96■■□□□ 1.27
Nr1i3O35627 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nr1i3O35627 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC22.95■■□□□ 1.26
Nr1i3O35627 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nr1i3O35627 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nr1i3O35627 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Nr1i3O35627 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nr1i3O35627 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nr1i3O35627 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.94■■□□□ 1.26
Nr1i3O35627 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nr1i3O35627 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC22.94■■□□□ 1.26
Nr1i3O35627 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nr1i3O35627 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC22.93■■□□□ 1.26
Nr1i3O35627 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nr1i3O35627 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.93■■□□□ 1.26
Nr1i3O35627 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nr1i3O35627 Gm43403-201ENSMUST00000198011 1786 ntBASIC22.93■■□□□ 1.26
Nr1i3O35627 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nr1i3O35627 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nr1i3O35627 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nr1i3O35627 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Nr1i3O35627 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC22.92■■□□□ 1.26
Nr1i3O35627 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
Nr1i3O35627 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nr1i3O35627 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nr1i3O35627 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nr1i3O35627 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
Nr1i3O35627 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nr1i3O35627 Gm11175-201ENSMUST00000116172 543 ntBASIC22.91■■□□□ 1.26
Nr1i3O35627 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.91■■□□□ 1.26
Nr1i3O35627 Gm27502-201ENSMUST00000183495 199 ntBASIC22.91■■□□□ 1.26
Nr1i3O35627 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
Nr1i3O35627 Gm38160-201ENSMUST00000193090 2499 ntBASIC22.91■■□□□ 1.26
Nr1i3O35627 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nr1i3O35627 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nr1i3O35627 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.9■■□□□ 1.26
Nr1i3O35627 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Nr1i3O35627 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Nr1i3O35627 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC22.89■■□□□ 1.25
Nr1i3O35627 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC22.89■■□□□ 1.25
Nr1i3O35627 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Nr1i3O35627 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nr1i3O35627 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC22.88■■□□□ 1.25
Nr1i3O35627 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nr1i3O35627 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Nr1i3O35627 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Nr1i3O35627 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC22.87■■□□□ 1.25
Nr1i3O35627 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nr1i3O35627 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nr1i3O35627 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nr1i3O35627 AC164883.3-201ENSMUST00000227396 1774 ntBASIC22.86■■□□□ 1.25
Nr1i3O35627 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nr1i3O35627 Gm7332-201ENSMUST00000118351 454 ntBASIC22.86■■□□□ 1.25
Nr1i3O35627 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nr1i3O35627 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Nr1i3O35627 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC22.86■■□□□ 1.25
Nr1i3O35627 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nr1i3O35627 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Nr1i3O35627 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.85■■□□□ 1.25
Nr1i3O35627 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Nr1i3O35627 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
Nr1i3O35627 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC22.85■■□□□ 1.25
Nr1i3O35627 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
Nr1i3O35627 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC22.84■■□□□ 1.25
Nr1i3O35627 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nr1i3O35627 Gm43592-201ENSMUST00000196922 1165 ntBASIC22.84■■□□□ 1.25
Nr1i3O35627 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nr1i3O35627 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC22.84■■□□□ 1.25
Nr1i3O35627 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Nr1i3O35627 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nr1i3O35627 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Nr1i3O35627 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nr1i3O35627 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nr1i3O35627 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms