Protein–RNA interactions for Protein: O35604

Npc1, Niemann-Pick C1 protein, mousemouse

Predictions only

Length 1,277 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npc1O35604 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC20.78■□□□□ 0.92
Npc1O35604 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Npc1O35604 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Npc1O35604 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Lrrc3b-201ENSMUST00000055211 1655 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC20.77■□□□□ 0.92
Npc1O35604 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Npc1O35604 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.91
Npc1O35604 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
Npc1O35604 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1O35604 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Npc1O35604 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1O35604 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1O35604 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1O35604 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.76■□□□□ 0.91
Npc1O35604 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Npc1O35604 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1O35604 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1O35604 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1O35604 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1O35604 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.75■□□□□ 0.91
Npc1O35604 Gm10232-201ENSMUST00000089221 720 ntBASIC20.75■□□□□ 0.91
Npc1O35604 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Npc1O35604 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Npc1O35604 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Npc1O35604 Gm15820-201ENSMUST00000201566 728 ntBASIC20.74■□□□□ 0.91
Npc1O35604 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.74■□□□□ 0.91
Npc1O35604 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1O35604 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1O35604 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Npc1O35604 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.74■□□□□ 0.91
Npc1O35604 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1O35604 Gm16464-201ENSMUST00000117815 1095 ntBASIC20.73■□□□□ 0.91
Npc1O35604 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1O35604 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.73■□□□□ 0.91
Npc1O35604 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Npc1O35604 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Npc1O35604 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.72■□□□□ 0.91
Npc1O35604 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Npc1O35604 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Npc1O35604 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Npc1O35604 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.7■□□□□ 0.9
Npc1O35604 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.7■□□□□ 0.9
Npc1O35604 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.7■□□□□ 0.9
Npc1O35604 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Npc1O35604 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.7■□□□□ 0.9
Npc1O35604 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.7■□□□□ 0.9
Npc1O35604 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Fnta-201ENSMUST00000016138 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Npc1O35604 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1O35604 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Npc1O35604 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1O35604 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Npc1O35604 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Npc1O35604 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
Npc1O35604 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Npc1O35604 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
Npc1O35604 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1O35604 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1O35604 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1O35604 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Npc1O35604 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1O35604 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Npc1O35604 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1O35604 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1O35604 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.66■□□□□ 0.9
Npc1O35604 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Npc1O35604 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.65■□□□□ 0.9
Npc1O35604 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC20.65■□□□□ 0.9
Npc1O35604 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC20.65■□□□□ 0.9
Npc1O35604 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Npc1O35604 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1O35604 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1O35604 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Npc1O35604 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms