Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Gm14523-201ENSMUST00000117260 558 ntBASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
Tnfrsf11bO08712 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Tnfrsf11bO08712 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC21.66■■□□□ 1.06
Tnfrsf11bO08712 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf11bO08712 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Tnfrsf11bO08712 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.65■■□□□ 1.06
Tnfrsf11bO08712 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC21.65■■□□□ 1.06
Tnfrsf11bO08712 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11bO08712 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11bO08712 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Tnfrsf11bO08712 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11bO08712 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11bO08712 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Tnfrsf11bO08712 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Gm5987-201ENSMUST00000196433 1151 ntBASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Tnfrsf11bO08712 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.62■■□□□ 1.05
Tnfrsf11bO08712 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Tnfrsf11bO08712 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11bO08712 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11bO08712 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Tnfrsf11bO08712 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Gm7332-201ENSMUST00000118351 454 ntBASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Gm12504-201ENSMUST00000120860 2231 ntBASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Tnfrsf11bO08712 Nsd1-206ENSMUST00000224918 1001 ntBASIC21.6■■□□□ 1.05
Tnfrsf11bO08712 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11bO08712 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11bO08712 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Tnfrsf11bO08712 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
Tnfrsf11bO08712 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11bO08712 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
Tnfrsf11bO08712 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.58■■□□□ 1.05
Tnfrsf11bO08712 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11bO08712 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11bO08712 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11bO08712 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Tnfrsf11bO08712 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC21.57■■□□□ 1.04
Tnfrsf11bO08712 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Tnfrsf11bO08712 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Gm38160-201ENSMUST00000193090 2499 ntBASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Tnfrsf11bO08712 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Tnfrsf11bO08712 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf11bO08712 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf11bO08712 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf11bO08712 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Tnfrsf11bO08712 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Tnfrsf11bO08712 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.53■■□□□ 1.04
Tnfrsf11bO08712 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.52■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms