Protein–RNA interactions for Protein: O08583

Alyref, THO complex subunit 4, mousemouse

Known RBP Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AlyrefO08583 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC21.64■■□□□ 1.05
AlyrefO08583 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
AlyrefO08583 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
AlyrefO08583 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC21.63■■□□□ 1.05
AlyrefO08583 Gm37179-201ENSMUST00000194862 823 ntBASIC21.63■■□□□ 1.05
AlyrefO08583 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC21.63■■□□□ 1.05
AlyrefO08583 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
AlyrefO08583 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
AlyrefO08583 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
AlyrefO08583 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.62■■□□□ 1.05
AlyrefO08583 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC21.62■■□□□ 1.05
AlyrefO08583 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.61■■□□□ 1.05
AlyrefO08583 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AlyrefO08583 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
AlyrefO08583 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC21.61■■□□□ 1.05
AlyrefO08583 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AlyrefO08583 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
AlyrefO08583 Gm12669-201ENSMUST00000122162 1009 ntBASIC21.61■■□□□ 1.05
AlyrefO08583 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.61■■□□□ 1.05
AlyrefO08583 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
AlyrefO08583 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
AlyrefO08583 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC21.6■■□□□ 1.05
AlyrefO08583 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
AlyrefO08583 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.6■■□□□ 1.05
AlyrefO08583 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
AlyrefO08583 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
AlyrefO08583 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AlyrefO08583 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AlyrefO08583 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AlyrefO08583 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
AlyrefO08583 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AlyrefO08583 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC21.58■■□□□ 1.05
AlyrefO08583 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
AlyrefO08583 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AlyrefO08583 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
AlyrefO08583 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
AlyrefO08583 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC21.57■■□□□ 1.04
AlyrefO08583 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC21.57■■□□□ 1.04
AlyrefO08583 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AlyrefO08583 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AlyrefO08583 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
AlyrefO08583 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
AlyrefO08583 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC21.56■■□□□ 1.04
AlyrefO08583 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.56■■□□□ 1.04
AlyrefO08583 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
AlyrefO08583 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
AlyrefO08583 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AlyrefO08583 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
AlyrefO08583 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
AlyrefO08583 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC21.54■■□□□ 1.04
AlyrefO08583 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC21.54■■□□□ 1.04
AlyrefO08583 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AlyrefO08583 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.54■■□□□ 1.04
AlyrefO08583 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
AlyrefO08583 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
AlyrefO08583 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
AlyrefO08583 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.53■■□□□ 1.04
AlyrefO08583 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
AlyrefO08583 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
AlyrefO08583 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
AlyrefO08583 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
AlyrefO08583 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.52■■□□□ 1.04
AlyrefO08583 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.52■■□□□ 1.04
AlyrefO08583 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
AlyrefO08583 Gm28536-201ENSMUST00000190971 1317 ntBASIC21.52■■□□□ 1.03
AlyrefO08583 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
AlyrefO08583 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AlyrefO08583 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
AlyrefO08583 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
AlyrefO08583 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
AlyrefO08583 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.5■■□□□ 1.03
AlyrefO08583 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
AlyrefO08583 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
AlyrefO08583 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
AlyrefO08583 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
AlyrefO08583 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC21.49■■□□□ 1.03
AlyrefO08583 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AlyrefO08583 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
AlyrefO08583 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.49■■□□□ 1.03
AlyrefO08583 Gm10399-202ENSMUST00000202768 748 ntBASIC21.49■■□□□ 1.03
AlyrefO08583 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC21.49■■□□□ 1.03
AlyrefO08583 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 155.6 ms