Protein–RNA interactions for Protein: G5E870

Trip12, E3 ubiquitin-protein ligase TRIP12, mousemouse

Known RBP Predictions only

Length 2,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trip12G5E870 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trip12G5E870 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC19.72■□□□□ 0.75
Trip12G5E870 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.72■□□□□ 0.75
Trip12G5E870 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Trip12G5E870 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trip12G5E870 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Trip12G5E870 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trip12G5E870 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.71■□□□□ 0.75
Trip12G5E870 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Trip12G5E870 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Trip12G5E870 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trip12G5E870 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Trip12G5E870 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trip12G5E870 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Trip12G5E870 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Trip12G5E870 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Trip12G5E870 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.68■□□□□ 0.74
Trip12G5E870 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Trip12G5E870 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Trip12G5E870 Golgb1-201ENSMUST00000023534 498 ntBASIC19.68■□□□□ 0.74
Trip12G5E870 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Trip12G5E870 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC19.67■□□□□ 0.74
Trip12G5E870 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trip12G5E870 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trip12G5E870 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trip12G5E870 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trip12G5E870 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trip12G5E870 Gm28731-201ENSMUST00000185564 1569 ntBASIC19.66■□□□□ 0.74
Trip12G5E870 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Gm6934-201ENSMUST00000194780 1905 ntBASIC19.66■□□□□ 0.74
Trip12G5E870 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trip12G5E870 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.66■□□□□ 0.74
Trip12G5E870 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
Trip12G5E870 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trip12G5E870 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trip12G5E870 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trip12G5E870 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trip12G5E870 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trip12G5E870 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trip12G5E870 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.64■□□□□ 0.74
Trip12G5E870 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.64■□□□□ 0.73
Trip12G5E870 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.64■□□□□ 0.73
Trip12G5E870 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trip12G5E870 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trip12G5E870 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trip12G5E870 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trip12G5E870 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trip12G5E870 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC19.63■□□□□ 0.73
Trip12G5E870 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
Trip12G5E870 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trip12G5E870 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.62■□□□□ 0.73
Trip12G5E870 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trip12G5E870 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.62■□□□□ 0.73
Trip12G5E870 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Trip12G5E870 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.62■□□□□ 0.73
Trip12G5E870 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trip12G5E870 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trip12G5E870 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trip12G5E870 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trip12G5E870 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trip12G5E870 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC19.61■□□□□ 0.73
Trip12G5E870 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.61■□□□□ 0.73
Trip12G5E870 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Trip12G5E870 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trip12G5E870 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trip12G5E870 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trip12G5E870 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trip12G5E870 Syt6-204ENSMUST00000118563 1843 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trip12G5E870 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trip12G5E870 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Trip12G5E870 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trip12G5E870 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trip12G5E870 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trip12G5E870 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trip12G5E870 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trip12G5E870 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Trip12G5E870 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Trip12G5E870 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC19.58■□□□□ 0.72
Trip12G5E870 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Trip12G5E870 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms