Protein–RNA interactions for Protein: E9Q0B4

Cdr1, Cerebellar degeneration-related antigen 1, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdr1E9Q0B4 Rax-201ENSMUST00000025396 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.93■□□□□ 0.94
Cdr1E9Q0B4 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdr1E9Q0B4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdr1E9Q0B4 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdr1E9Q0B4 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdr1E9Q0B4 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC20.89■□□□□ 0.93
Cdr1E9Q0B4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdr1E9Q0B4 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdr1E9Q0B4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Gm45855-201ENSMUST00000212546 880 ntBASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdr1E9Q0B4 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdr1E9Q0B4 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdr1E9Q0B4 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdr1E9Q0B4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cdr1E9Q0B4 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdr1E9Q0B4 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cdr1E9Q0B4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdr1E9Q0B4 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cdr1E9Q0B4 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Cdr1E9Q0B4 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC20.83■□□□□ 0.93
Cdr1E9Q0B4 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cdr1E9Q0B4 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Cdr1E9Q0B4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC20.83■□□□□ 0.92
Cdr1E9Q0B4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Cdr1E9Q0B4 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Cdr1E9Q0B4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms