Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Trav12d-1A0N8R0 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Trav12d-1A0N8R0 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Trav12d-1A0N8R0 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Trav12d-1A0N8R0 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Trav12d-1A0N8R0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Hsf1-207ENSMUST00000228371 2102 ntBASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Trav12d-1A0N8R0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Trav12d-1A0N8R0 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Trav12d-1A0N8R0 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-1A0N8R0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-1A0N8R0 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-1A0N8R0 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-1A0N8R0 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Trav12d-1A0N8R0 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Trav12d-1A0N8R0 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Trav12d-1A0N8R0 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Trav12d-1A0N8R0 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.05■□□□□ 0.32
Trav12d-1A0N8R0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms