Protein–RNA interactions for Protein: A0A0G2JF93

Trav13n-2, T cell receptor alpha variable 13D-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-2A0A0G2JF93 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trav13n-2A0A0G2JF93 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 AC164433.2-201ENSMUST00000226346 1701 ntBASIC14.02□□□□□ -0.16
Trav13n-2A0A0G2JF93 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13n-2A0A0G2JF93 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-2A0A0G2JF93 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav13n-2A0A0G2JF93 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.02□□□□□ -0.17
Trav13n-2A0A0G2JF93 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trav13n-2A0A0G2JF93 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gm28731-201ENSMUST00000185564 1569 ntBASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gm37136-201ENSMUST00000194368 194 ntBASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav13n-2A0A0G2JF93 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trav13n-2A0A0G2JF93 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav13n-2A0A0G2JF93 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
Trav13n-2A0A0G2JF93 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav13n-2A0A0G2JF93 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-2A0A0G2JF93 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-2A0A0G2JF93 Borcs6-201ENSMUST00000051888 1862 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Trav13n-2A0A0G2JF93 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
Trav13n-2A0A0G2JF93 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav13n-2A0A0G2JF93 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav13n-2A0A0G2JF93 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Iqck-206ENSMUST00000208658 2891 ntBASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav13n-2A0A0G2JF93 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav13n-2A0A0G2JF93 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms