Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Trbv26A0A0B4J1P5 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm43566-201ENSMUST00000196851 808 ntBASIC17.68■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Trbv26A0A0B4J1P5 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv26A0A0B4J1P5 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.66■□□□□ 0.42
Trbv26A0A0B4J1P5 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm13238-201ENSMUST00000117655 780 ntBASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv26A0A0B4J1P5 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trbv26A0A0B4J1P5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
Trbv26A0A0B4J1P5 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv26A0A0B4J1P5 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Gm28536-201ENSMUST00000190971 1317 ntBASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv26A0A0B4J1P5 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trbv26A0A0B4J1P5 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv26A0A0B4J1P5 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trbv26A0A0B4J1P5 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv26A0A0B4J1P5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Nsd1-206ENSMUST00000224918 1001 ntBASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
Trbv26A0A0B4J1P5 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv26A0A0B4J1P5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms