Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trav19A0A0B4J1K4 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.9■□□□□ 0.14
Trav19A0A0B4J1K4 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Gm7432-201ENSMUST00000210343 879 ntBASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trav19A0A0B4J1K4 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Trav19A0A0B4J1K4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav19A0A0B4J1K4 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav19A0A0B4J1K4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav19A0A0B4J1K4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav19A0A0B4J1K4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
Trav19A0A0B4J1K4 Pkd1-207ENSMUST00000228550 1050 ntBASIC15.85■□□□□ 0.13
Trav19A0A0B4J1K4 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav19A0A0B4J1K4 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Gm11599-201ENSMUST00000118720 878 ntBASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav19A0A0B4J1K4 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav19A0A0B4J1K4 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Trav19A0A0B4J1K4 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav19A0A0B4J1K4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav19A0A0B4J1K4 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC15.83■□□□□ 0.12
Trav19A0A0B4J1K4 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav19A0A0B4J1K4 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
Trav19A0A0B4J1K4 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav19A0A0B4J1K4 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav19A0A0B4J1K4 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav19A0A0B4J1K4 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav19A0A0B4J1K4 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms